Hybridization studies and reciprocal crosses were carried out on
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Inbred lines generated from 10 maize population developed between 1979 and 2008 were used to investigate the inbreeding depression of tropical maize varieties developed at different breeding eras and evaluated in (optimal and stressed) condition. Across all the environments used for this study, estimates of inbred depression (I) for grain yield which ranged from 15.63% for optimum environment to 35.85 under stem borer infestation, showed differences in the severity of the effects of practicing inbreeding in each of the populations and the different environments. The highest values of inbreeding depression for grain yield were recorded under stem borer infestation. The effect of inbreeding was the most severe for var. DMR-LSR-W under borer infestation and least for DMR-LSR-Y in stress free environment. This is an indication that the responses of the maize populations to inbreeding as well as the rate of attaining homozygosity differed with environments. Across the four different environments under which the genotypes were evaluated, average inbreeding depression for grain yield were greater relative to other traits considered which should be expected since grain yield is a quantitatively inherited trait, governed by many genes each with minor effects.
The in vitro vegetative propagation technique of the
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Peanut variety identification is essential for protecting the intellectual property rights of researchers, ensuring quality management for producers, and safeguarding the interests of seed production stakeholders. In this research, we developed a molecular marker set for peanut variety identification using single nucleotide polymorphism (SNP) markers. We used genotyping data and selection procedures, including decision tree and optimal combination selection, to identify a minimal set of informative SNP sites. These SNPs were then converted into Kompetitive allele-specific PCR (KASP) markers. We selected a subset of 14 informative SNPs from a pool of 22 candidate markers, representing the minimum number of combinations required to distinguish cultivars. SNPs obtained from the microarrays were converted to KASP markers and then evaluated across 51 peanut varieties. The developed marker set, which consists of a minimal number of markers, is expected to be a rapid and cost-effective tool for peanut variety identification.
Soybean [
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Rice domestication has led to cultivated rice with no or short awns. Discovery of novel genes associated to awn length is of paramount importance for understanding the molecular mechanisms for the transformation of wild rice long awns to awnless cultivated rice. In this study, we employed Next-Generation Sequencing based QTL-seq approach to identify genomic regions associated with awn length using mapping population derived from a cross between awnless Tun Sart and awned Sobaekmangsudo. QTL-seq analysis identified two awn length QTLs viz.
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Hairs on the leaf are an important agronomic characteristic for rice growth and farming. The segregation ratio of pubescence in the F2 population showed that the pubescence on the leaf is controlled by a single dominant gene. Fine mapping for the gene was carried out by producing an Indel (insertion-deletion) primer based on BSA-Seq data. Results of the analysis revealed within the candidate site the presence of