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"AMMI"

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"AMMI"

Research Articles
Estimating Pedigree-Based Breeding Values and Stability Parameters of Elite Rice Breeding Lines for Yield under Salt Stress during the Boro Season in Bangladesh
M. Ruhul Quddus, M. Akhlasur Rahman, Nusrat Jahan, Sanjoy K. Debsharma, Ribed F. Disha, M. Moniruzzaman Hasan, Tamal L. Aditya, KM Iftekharuddaula, Bertrand C.Y. Collard
Plant Breed. Biotech. 2019;7(3):257-271.   Published online September 1, 2019
DOI: https://doi.org/10.9787/PBB.2019.7.3.257

In salinity affected areas, variation in salinity level is the major cause of yield fluctuations in rice during the dry season (boro season). To sustain food security in Bangladesh, plant breeders need to develop new rice varieties which are higher yielding, salinity tolerant and stable across different environments. We evaluated the yield performance and stability of 51 rice elite genotypes including two salinity tolerant rice varieties (BRRI dhan67 and BINA dhan-10) and the dominant boro rice variety (BRRI dhan28) in three locations, including a salinity “hotspot”. Best linear unbiased predictions (BLUPs) were used to identify superior genotypes from multi-environment trials. Selection from a large set of candidates is required for evaluation and recommending a new variety for release. Estimated breeding values (EBVs) were used to select parents. Six parents with high EBVs (BR8982-5, IR 87870-6-1-1-1-1-B; BR8943-B-1-2-7, BR8940-B-17-4-7, A69-1 and BR8943-B-5-5-14) would be useful as parents to develop new breeding populations. To evaluate yield performance and stability across environments, we used additive main effects and multiplicative interaction (AMMI) model using a randomized complete block design with two replications. Genotype × environmental analysis was performed using GGE biplot analysis. Based on yield performance and stability, BR8982-5, IR 87870-6-1-1-1-1-B, BR8943-B-1-2-7, BR8940-B-17-4-7, A69-1 and BR8943-B-5-5-14 were promising across the tested environments, as they showed yield advantages over check varieties. The results in this study will be useful for selecting the elite lines suitable for salinity affected areas and parents for rapid breeding of salinity tolerance.

Citations

Citations to this article as recorded by  
  • Identification of elite rice lines with better breeding values using genomic prediction and multi-trait genotype ideotype distance index (MGIDI) for grain yield under irrigation cropping system
    S. S. Chaity, M. R. Islam, M. Faruquee, J. U. Ahmed, A. K. M. Aminul Islam, C Anilkumar
    PLOS One.2026; 21(2): e0340188.     CrossRef
  • Mean deviation is reliable parameter for evaluating inbred-line yield potential in hybrid breeding
    Y.D. Zhang, H.M. Chen, Z.W. Li, W.H. Yao, F.Y. Jiang, T.Z. Wang, I. Babar, C.X. Xu
    Journal of Crop Improvement.2026; 40(3): 320.     CrossRef
  • Identification of High-Performing and Stable Pearl Millet Genotypes Using Multi-trait Stability Index
    Tripti Singhal, C. Tara Satyavathi, S. P. Singh, Mukesh Sankar, Sunaina Yadav, M. Mallik, C. Bharadwaj
    Agricultural Research.2026; 15(1): 92.     CrossRef
  • AMMI analysis of elite bread wheat (Triticum aestivum L.) selections for genotype by environment interaction and stability of grain yield in Southern Ethiopia
    Liyew Alemayehu, Mesfin Kebede, Eyasu Wada, Mehdi Rahimi
    PLOS ONE.2025; 20(1): e0318559.     CrossRef
  • Multivariate analysis for identifying high-yielding rice cultivars based on seed yield and morphological traits
    Md. Asadulla Al Galib, Sumaiya Farzana, Tusher Chakrobarty, Mohammad Zahidul Islam, Bir Jahangir Shirazy, Md. Akhlasur Rahman, Shahin Imran, Md. Tahjib-Ul-Arif, Mohammad Saidur Rhaman
    Discover Plants.2025;[Epub]     CrossRef
  • Cultivating sustainable futures: multi-environment evaluation and seed yield stability of faba bean (Vicia faba L.) genotypes by using different stability parameters in Ethiopia
    Demekech Wondaferew, Destaw Mullualem, Walelgn Bitewlgn, Zelalem Kassa, Yekoye Abebaw, Habib Ali, Kelelaw Kebede, Tessema Astatkie
    BMC Plant Biology.2024;[Epub]     CrossRef
  • Identification and evaluation of high-performing advanced germplasm of rice through morphological and breeding value analysis
    Md. Ariful Islam, Md. Moniruzzaman Hasan, Mohammad Anwar Hossain, Md. Ashraful Haque, Md. Nur Alam Siddique, Md. Shamsuddoha, Muhammad Ashraful Habib, Sumaiya Sultana Risha
    Discover Agriculture.2024;[Epub]     CrossRef
  • Bunch component performance of AVROS and Yangambi population
    A N Simamora, H Y Rahmadi, Y Yenni, Sujadi, H A Siregar, N Supena, M Arif, E Supriyanto, A R Purba
    IOP Conference Series: Earth and Environmental Science.2024; 1308(1): 012017.     CrossRef
  • Developing climate-resilient rice varieties (BRRI dhan97 and BRRI dhan99) suitable for salt-stress environments in Bangladesh
    Sanjoy K. Debsharma, M. Akhlasur Rahman, Mahmuda Khatun, Ribed F. Disha, Nusrat Jahan, Md. Ruhul Quddus, Hasina Khatun, Sharifa S. Dipti, Md. Ibrahim, K. M. Iftekharuddaula, Md. Shahjahan Kabir, Md Ashrafuzzaman
    PLOS ONE.2024; 19(1): e0294573.     CrossRef
  • Genotype-by-environment interaction and stability analysis of grain yield of bread wheat (Triticum aestivum L.) genotypes using AMMI and GGE biplot analyses
    Destaw Mullualem, Alemu Tsega, Tesfaye Mengie, Desalew Fentie, Zelalem Kassa, Amare Fassil, Demekech Wondaferew, Temesgen Assefa Gelaw, Tessema Astatkie
    Heliyon.2024; 10(12): e32918.     CrossRef
  • Comparative analysis of parametric and non-parametric statistics for grain yield stability in rice (Oryza sativa L.)
    Hari Kesh, Khushi Ram Battan, Mujahid Khan
    Vegetos.2024; 38(2): 686.     CrossRef
  • B × R cross de rived parental line development using breeding value: A new model for hybrid rice parental line development
    Md. Ruhul Quddus, Md. Jamil Hasan, Mst. Umma Kulsum, Satyen Mondal
    Plant Gene.2023; 36: 100431.     CrossRef
  • SNP Based Trait Characterization Detects Genetically Important and Stable Multiple Stress Tolerance Rice Genotypes in Salt-Stress Environments
    Sanjoy K. Debsharma, Mohammad Akhlasur Rahman, Mohammad Ruhul Quddus, Hasina Khatun, Ribed F. Disha, Popy R. Roy, Sharif Ahmed, Mohamed El-Sharnouby, Khandakar Md. Iftekharuddaula, Salman Aloufi, Fahad M. Alzuaibr, Mohammed Alqurashi, Mohamed I. Sakran, M
    Plants.2022; 11(9): 1150.     CrossRef
  • Harnessing on Genetic Variability and Diversity of Rice (Oryza sativa L.) Genotypes Based on Quantitative and Qualitative Traits for Desirable Crossing Materials
    Sanjoy K. Debsharma, Md. Abu Syed, Md. Hannan Ali, Sheikh Maniruzzaman, Popy R. Roy, Marian Brestic, Ahmed Gaber, Akbar Hossain
    Genes.2022; 14(1): 10.     CrossRef
  • Evaluating Genotype × Environment Interactions of Yield Traits and Adaptability in Rice Cultivars Grown under Temperate, Subtropical and Tropical Environments
    Xing Huang, Su Jang, Backki Kim, Zhongze Piao, Edilberto Redona, Hee-Jong Koh
    Agriculture.2021; 11(6): 558.     CrossRef
  • Estimating Breeding Value of Agronomic Traits in Oriental Tobacco Genotypes under Broomrape Stress and Normal Conditions
    Maryam Tahmasbali, Reza Darvishzadeh, Amir Fayaz Moghaddam
    Plant Genetic Researches.2020; 7(1): 103.     CrossRef
  • Application of Pedimap: a pedigree visualization tool to facilitate the decisioning of rice breeding in Sri Lanka
    Rasika Rathnayake, Shehan Sahibdeen, Kapila Udawela, Cholani Weebadde, Wijayasiri Weerakoon, Suneth Sooriyapathirana
    Scientific Reports.2020;[Epub]     CrossRef
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Phenotypic Stability Analysis of Yield Components in Cashew (Anacardium occidentale L.) Using Additive Main Effect and Multiplicative Interaction (AMMI) and GGE Biplot Analyses
Olawale M. Aliyu, Oluwatosin O. Adeigbe, Oluwafemi O. Lawal
Plant Breed. Biotech. 2014;2(4):354-369.   Published online December 31, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.4.354

Perennial poor fruit-set and variability in tree yield are among major problems of cashew nut production. Thus, development of improved stable genotypes would be a sustainable strategy to address this perpetual problem in order to boost income and livelihood of many smallholder farmers of this important commodity crop. Here, we have applied additive main effect and multiplicative interaction (AMMI) and genotype, genotype by environment (GGE) biplot analysis to a 3-year multi-locational trial data on nine yield component characters of cashew to evaluate phenotypic stability across diverse environments. Variance analysis showed significant variability in the cashew genotypes and strong influence of genotype by environment (GxE) on tree yield as none of the genotypes was stable for any of the yield components across locations. GxE data showed that a substantial portion of the variation was explained by the genotype (highly heritable), accounting for between 10% and 87% of the variation, while the environment accounted for between 0.7% and 37%. Data showed significant higher values of interaction (GxE) than the respective values for environment, and were mostly captured and could be explained by the first principal component axis (IPCA 1) for all the yield component characters. There was an inverse relationship between stability and yield as the best three yielding genotypes (KT_26, IW_222 and IW_31) were found to be the most unstable. Among the yield component tested, hermaphrodite flowers per panicle, nuts per panicle, nuts per tree, nut weight, and tree fruiting efficiency were identified to be critical components for nut yield. Although there was wide variation between the three environments evaluated, the data effectively identified two mega-environments (ME), and two superior genotypes (IW_222 and KT_26) suitable for these two mega-environments. The GxE complex exposes the short-comings of broad recommendations of common agronomic-husbandry technologies across diverse cashew ecologies as each mega-environment would require specific adaptable technologies for optimal plant output. Above all, the data presented here underscore the importance of multi-locational evaluation of genotypes for varietal development in cashew.

Citations

Citations to this article as recorded by  
  • Growth and yield response of cashew (Anacardium occidentale L.) clones to spacing in the Guinea Savanna zone of Ghana
    Sampson Konlan, Michael Teye Barnor, Alfred Arthur, Jerome Agbesi Dogbatse, Jacob Danso, Godfred Kwaku Awudzi, Moses Kwame Aidoo, Frank Owusu‐Ansah
    Agrosystems, Geosciences & Environment.2026;[Epub]     CrossRef
  • Identification of superior dwarf cashew clones by graphic analysis in Pacajus, Ceará, Brazil
    Gilberto Ken Yokomizo, Dheyne Silva Melo, Kuang Hongyu, Luiz Augusto Lopes Serrano, Francisco da Chagas Vidal-Neto
    Acta Biológica Colombiana.2026; 31(1): 90.     CrossRef
  • Efeitos dos meses no comportamento de progênies de açaizeiro para caracteres de cacho de frutos
    Gilberto Ken Iti Yokomizo, Kuang Hongyu, João Tomé de Farias Neto, Francisco de Oliveira Cruz Júnior
    PesquisAgro.2025; 9(1): 15.     CrossRef
  • Analysis of stability for nut yield and ancillary traits in cashew (Anacardium occidentale L.)
    E. Eradasappa, G. S. Mohana, M. Poduval, K. Sethi, M. S. Aneesa Rani, I. K. Lourdusamy, S. Velmurugan, M. Manjusha, T. N. Raviprasad, C. Anilkumar
    Scientific Reports.2024;[Epub]     CrossRef
  • Assessment of adaptability of cashew varieties to changing environmental conditions of Odisha
    Kabita Sethi, Manasi Dash, P.K. Panda, Mohana G.S., J. Dinakara Adiga
    Scientia Horticulturae.2024; 324: 112577.     CrossRef
  • Genotype × environment interaction for establishment and precocity traits among elite cocoa (Theobroma cacao L.) hybrids in Ghana
    Atta Ofori, Francis Kwame Padi, Abraham Akpertey, Kwabena Asare Bediako, Alfred Arthur, Paul Kwasi Krah Adu-Gyamfi, Daniel Nyadanu, Ebenezer Obeng-Bio, Esther Anokye
    Euphytica.2023;[Epub]     CrossRef
  • Estabilidade e adaptabilidade de clones de cajueiro para caracteres fenológicos
    Gilberto Ken Iti Yokomizo, Francisco das Chagas Vidal Neto, Kuang Hongyu, Dheyne Silva Melo, Luiz Augusto Lopes Serrano
    Agrarian.2021; 14(54): 412.     CrossRef
  • Broadening the Gene Pool of Cashew (Anacardium occidentale) for Survival and Precocity
    Paul K. K. Adu-Gyamfi, Michael Barnor, Abraham Akpertey, Abu Mustapha Dadzie, Edem Anyomi, Seth Osei-Akoto, Francis Padi
    Agricultural Research.2021; 10(4): 613.     CrossRef
  • Genetic variability and trait association studies in cashew (Anacardium occidentale L.)
    Paul K.K. Adu-Gyamfi, Mustapha Abu Dadzie, Michael Barnor, Abraham Akpertey, Alfred Arthur, Seth Osei-Akoto, Atta Ofori, Francis Padi
    Scientia Horticulturae.2019; 255: 108.     CrossRef
  • Farmers’ Perceptions on the Agricultural Use of Human Urine in the Central Amazon
    Patrícia Müller, João Paulo Borges Pedro, Carlos Henrique De Castro Freitas
    Mundo Amazónico.2017;[Epub]     CrossRef
  • Análise GGE biplot na avaliação de características de cachos em Açaizeiros da região Amazônica
    Gilberto Ken Iti Yokomizo, João Tomé de Farias Neto, Kuang Hongyu, Maria Do Socorro Padilha de Oliveira
    Mundo Amazónico.2017;[Epub]     CrossRef
  • Genomic selection for wheat traits and trait stability
    Mao Huang, Antonio Cabrera, Amber Hoffstetter, Carl Griffey, David Van Sanford, José Costa, Anne McKendry, Shiaoman Chao, Clay Sneller
    Theoretical and Applied Genetics.2016; 129(9): 1697.     CrossRef
  • 65 View
  • 1 Download
  • 12 Crossref