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"Lutful Hassan"

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"Lutful Hassan"

Research Articles
Increasing New Root Length Reflects Survival Mechanism of Rice (Oryza sativa L.) Genotypes under PEG-Induced Osmotic Stress
Afsana Hannan, Lutful Hassan, Md. Najmol Hoque, Md. Tahjib-Ul- Arif, Arif Hasan Khan Robin
Plant Breed. Biotech. 2020;8(1):46-57.   Published online March 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.1.46

Rice is globally one of the most important cereal crops that faces osmotic stress under any kind of abiotic stresses. An experiment was conducted under controlled condition to study the effects of polyethylene glycol (PEG) induced osmotic stress on root and root hair morphology and associated biochemical traits in four morphologically diverse rice genotypes. Plants were grown hydroponically. Two treatments, 0% (control) and 5% PEG 6000 (w/v), were imposed on 38 days old plants for 17 days’ duration. Main root axis length at first three youngest root bearing phytomers (Pr1-Pr3) was increased in Binadhan-11 but decreased in Binadhan-7 and BRRI dhan 71 under 5% PEG treatment compared to control. This result indicated that Binadhan-11 increased new root length perhaps to explore stress free environment. Length of L-type first order lateral root was also significantly increased by 2.03 fold in Binadhan-11 under 5% PEG treatment compared to control. Density and length of root hairs were increased at first order lateral roots in Binadhan-11 under 5% PEG treatment compared to control treatment those contributed largely to root surface area. Measurements of H2O2 and MDA revealed that Binadhan-11 was less affected by the oxidative damage caused by PEG. Data provides insight into the root morphological plasticity of four morphologically diverse rice varieties under PEG-induced osmotic stress.

Citations

Citations to this article as recorded by  
  • Bacterial Endophytes and Silicon Enhance Root System Plasticity of Upland Rice Under Combined Water and Phosphorus Deficit
    Rodrigo Silva de Oliveira, Akintunde Abiodun Ajulo, Anna Cristina Lanna, Marta Cristina Corsi de Filippi
    Journal of Soil Science and Plant Nutrition.2026; 26(1): 907.     CrossRef
  • Salinity and Polyethylene‐Glycol (PEG)‐Induced Osmotic Stress Alters the Early Vegetative Shoot and Root Morphology of Sweet Potato Genotypes in Hydroponic Culture
    Rebeka Sultana, Nikunjo Chakroborty, Jannatul Afrin, Yousuf Ali, Sarah Jabeen Mou, Jobadatun Naher, Arif Hasan Khan Robin
    New Zealand Journal of Botany.2026;[Epub]     CrossRef
  • Highway to stress: Proline dynamics in tomato plants under osmotic disturbances
    Clara Konrad, Sofia Spormann, Pedro Nadais, Maria Martins, Cristiano Soares, Fernanda Fidalgo
    Plant Physiology and Biochemistry.2026; 237: 111496.     CrossRef
  • Unravelling root system architecture plasticity in response to abiotic stresses in maize
    Garudapalya Muniswamy Keerthi, Mallana Gowdra Mallikarjuna, Shilendra Kumar Jha, Rakesh Pandey, Palanisamy Veeraya, Hirenallur Chandappa Lohithaswa, Viswanathan Chinnusamy
    Scientific Reports.2025;[Epub]     CrossRef
  • Phytohormonal strategies for managing crop responses to abiotic stresses: a review
    Md. Najmol Hoque, Afsana Hannan, Shahin Imran, Fatema Tuz-zohra, Tania Sultana, Md. Mahdi Hasan Seen, Syed Sakib Tahmid, Tanvir Mahmood Fahim, A. K. M. Mominul Islam, Mohammad Saidur Rhaman
    Discover Plants.2024;[Epub]     CrossRef
  • Investigation the effect of drought stress on tolerant and resistant rice (Oryza sativa L.) varieties in terms of morphologic and genetic characters
    Yunus Emre Arvas, Muhammed Said Yolci, Sevgi Marakli
    Genetic Resources and Crop Evolution.2023; 70(2): 427.     CrossRef
  • Plant Growth-Promoting Rhizobacteria-Mediated Adaptive Responses of Plants Under Salinity Stress
    Md. Najmol Hoque, Afsana Hannan, Shahin Imran, Newton Chandra Paul, Md. Fuad Mondal, Md. Mahabubur Rahman Sadhin, Jannatul Mawa Bristi, Fariha Shahid Dola, Md. Abu Hanif, Wenxiu Ye, Marian Brestic, Mohammad Saidur Rhaman
    Journal of Plant Growth Regulation.2023; 42(3): 1307.     CrossRef
  • Seed Priming with MeJa Prevents Salt-Induced Growth Inhibition and Oxidative Damage in Sorghum bicolor by Inducing the Expression of Jasmonic Acid Biosynthesis Genes
    Takalani Mulaudzi, Gershwin Sias, Mulisa Nkuna, Nzumbululo Ndou, Kaylin Hendricks, Vivian Ikebudu, Abraham J. Koo, Rachel F. Ajayi, Emmanuel Iwuoha
    International Journal of Molecular Sciences.2023; 24(12): 10368.     CrossRef
  • Nitrogen Addition Alleviates Cadmium Toxicity in Eleocarpus glabripetalus Seedlings
    Meihua Liu, Mengjiao Shi, Haili Gao, Yu Zheng, Lita Yi
    Forests.2023; 14(6): 1264.     CrossRef
  • Phenotypic plasticity in Cucurbita maxima and C. moschata seedlings as a measure of drought stress tolerance under pot screening
    Philisiwe Felicity Mhlanga, Shakira Shaik
    South African Journal of Botany.2023; 159: 290.     CrossRef
  • Relative contribution of different members of OsDREB gene family to osmotic stress tolerance in indica and japonica ecotypes of rice
    K. Chakraborty, P. Jena, S. Mondal, G. K. Dash, S. Ray, M. J. Baig, P. Swain
    Plant Biology.2022; 24(2): 356.     CrossRef
  • Comparative analysis of drought-responsive physiological and transcriptome in broomcorn millet (Panicum miliaceum L.) genotypes with contrasting drought tolerance
    Yuhao Yuan, Long Liu, Yongbin Gao, Qinghua Yang, Kongjun Dong, Tianpeng Liu, Baili Feng
    Industrial Crops and Products.2022; 177: 114498.     CrossRef
  • Application of consecutive polyethylene glycol treatments for modeling the seminal root growth of rice under water stress
    Pepi Nur Susilawati, Ryosuke Tajima, Yuti Giamerti, Yi Yang, Muhammad Prama Yufdy, Iskandar Lubis, Koki Homma
    Scientific Reports.2022;[Epub]     CrossRef
  • Polyethylene glycol mediated improved shoot proliferation, foliar morpho-anatomy, and rooting of micropropagated shoots of Spathoglottis plicata Blume
    Manokari M, Priyadharshini S, Cokulraj M, Jayaprakash K, Abhijit Dey, Mohammad Faisal, Abdulrahman A. Alatar, Anshu Alok, Mahipal S. Shekhawat
    South African Journal of Botany.2022; 146: 897.     CrossRef
  • Multivariate Analysis of Morpho-Physiological Traits Reveals Differential Drought Tolerance Potential of Bread Wheat Genotypes at the Seedling Stage
    Mohammed Mohi-Ud-Din, Md. Alamgir Hossain, Md. Motiar Rohman, Md. Nesar Uddin, Md. Sabibul Haque, Jalal Uddin Ahmed, Akbar Hossain, Mohamed M. Hassan, Mohammad Golam Mostofa
    Plants.2021; 10(5): 879.     CrossRef
  • PEG-Induced Osmotic Stress Alters Root Morphology and Root Hair Traits in Wheat Genotypes
    Arif Hasan Khan Robin, Shatabdi Ghosh, Md. Abu Shahed
    Plants.2021; 10(6): 1042.     CrossRef
  • Time Course of Root Axis Elongation and Lateral Root Formation in Perennial Ryegrass (Lolium perenne L.)
    Arif Hasan Khan Robin, Louis John Irving, Jim Crush, Hans Schnyder, Fernando Alfredo Lattanzi, Cory Matthew
    Plants.2021; 10(8): 1677.     CrossRef
  • Polyethylene Glycol Induced Osmotic Stress Affects Germination and Seedling Establishment of Wheat Genotypes
    Shatabdi Ghosh, Md. Abu Shahed, Arif Hasan Khan Robin
    Plant Breeding and Biotechnology.2020; 8(2): 174.     CrossRef
  • Root Development and Anti-Oxidative Response of Rice Genotypes under Polyethylene Glycol Induced Osmotic Stress
    Juthy Abedin Nupur, Afsana Hannan, Abir Ul Islam, G H M Sagor, Arif Hasan Khan Robin
    Plant Breeding and Biotechnology.2020; 8(2): 151.     CrossRef
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Genome-Wide Characterization and Expression Profiling of Plant-Specific PLATZ Transcription Factor Family Genes in Brassica rapa L.
Jaber Bin Azim, Md. Fahim Hassan Khan, Lutful Hassan, Arif Hasan Khan Robin
Plant Breed. Biotech. 2020;8(1):28-45.   Published online March 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.1.28

Plant AT-rich sequence and zinc-binding (PLATZ) proteins constitute a plant-specific transcription factor family with two conserved zinc-dependent DNA-binding domains. The PLATZ proteins operate significant functions in regulating plant development and resistance. To date, PLATZ genes have been studied only in a few model plants, including Arabidopsis, rice, maize and soybean, but not yet in any Brassica species. We identified 24 Brassica rapa PLATZ gene family (BrPLATZ) genes through genome-wide characterization and profiled their expression using available RNA-Sequencing data. We divided 153 PLATZ proteins from eight plant species into seven groups based on sequence alignment and phylogeny. The BrPLATZ genes were generally conserved in groups with similar motif and exon-intron distribution. The 24 BrPLATZ genes were located in eight of the ten B. rapa chromosomes, with segmental duplication detected in 20 paralogs. Analysis of Ka/Ks ratios revealed that the duplicated genes were under purifying selection. Cis-elements analysis implied that BrPLATZ genes are diverse in functions including tissue-specific, stress and hormone responsive expressions. Furthermore, expression profiling based on RNA-sequencing data revealed that the BrPLATZ genes were expressed in various tissues, with most genes preferentially expressed in flower and silique compared to other tissues. Systematic analysis revealed structural and functional diversity among BrPLATZ proteins, which indicated the possibility of diverse functions of BrPLATZ genes in development and stress resistance. The characterization of PLATZ gene family members may aid in the selection of appropriate candidate genes responsible for biological functions in B. rapa and relevant species.

Citations

Citations to this article as recorded by  
  • Molecular profiling of PLATZ gene family in pepper (Capsicum annuum L.) and overexpression of CaPLATZ6 confers enhanced resistance to anthracnose pathogen, Colletotrichum truncatum L.
    Swarna Manjari Mishra, Sravya Sruti Tamarapalli, Rukmini Mishra, Raj Kumar Joshi
    Physiological and Molecular Plant Pathology.2025; 138: 102700.     CrossRef
  • Genome-wide characterization of monoacylglycerol lipase (MAGL) gene family in soybean and functional analysis of GmMAGLs in storage lipid metabolism and drought resistance
    Haiqing Jing, Yan Sun, Bicheng Wang, Juhua Ma, Kun Wan, Zhanqian Li, Yali Zhou, Runzhi Li, Haiping Zhang, Jinai Xue
    BMC Genomics.2025;[Epub]     CrossRef
  • PLATZ transcription factors gene family in Brassica napus: genome-wide identification and expression analysis to abiotic stresses
    Sana Basharat, Pingwu Liu, Muhammad Waseem
    BMC Genomics.2025;[Epub]     CrossRef
  • RcPLATZ8 as a novel negative regulator of flowering in Rosa chinensis
    Yifang Peng, Qi Li, Yao Gong, Qian Yang, Qijing Dong, Yu Han
    Plant Cell Reports.2025;[Epub]     CrossRef
  • Exploring the Roles of the Plant AT-Rich Sequence and Zinc-Binding (PLATZ) Gene Family in Tomato (Solanum lycopersicum L.) Under Abiotic Stresses
    Bei Fan, Min Ren, Guoliang Chen, Xue Zhou, Guoting Cheng, Jinyu Yang, Huiru Sun
    International Journal of Molecular Sciences.2025; 26(4): 1682.     CrossRef
  • Genome-Wide Identification of CaPLATZ Family Members in Pepper and Their Expression Profiles in Response to Drought Stress
    Xingliang Wang, Yue Huang, Na Yang, Xue Wang, Yuanqian Wang, Wenyao Ma, Hui Zhang
    Genes.2025; 16(6): 632.     CrossRef
  • Genome wide identification and characterization of EPFL genes and its potential association with male sterility in Brassica rapa
    Kang Wang, Yongkang Wang, Xiaoyan Tang, Na Liao, Danni Yang, Wenjie Wang, Lingyun Yuan, Jinfeng Hou, Jianqiang Wu, Chenggang Wang, Guohu Chen
    Scientific Reports.2025;[Epub]     CrossRef
  • PLATZ transcription factors and their emerging roles in plant responses to environmental stresses
    Hongxia Zhang, Lu Liu, Zhenzhen Li, Shuo Wang, Li Huang, Sue Lin
    Plant Science.2025; 352: 112400.     CrossRef
  • Genome-wide analysis of the PLATZ gene family provides insights into the genome evolution of cultivated peanut (Arachis hypogaea, Leguminosae)
    Sergio Sebastián Samoluk, Guillermo Seijo
    Genetic Resources and Crop Evolution.2025; 72(4): 4809.     CrossRef
  • PLATZ transcription factors: Roles in plant growth, development, and stress adaptation
    Shanshan Zeng, Leeza Tariq, Yan Bi, Mengmeng Guo, Hui Wang, Fengming Song
    Plant Stress.2025; 18: 101075.     CrossRef
  • Genome-Wide Analysis of the PLATZ Gene Family and Identification of Seed Development-Related Genes in Flax [ Linum usitatissimum L.]
    Jing Li, Wei He, Zhigang Dai, Dongwei Xie, Jian Sun
    Journal of Natural Fibers.2024;[Epub]     CrossRef
  • GhiPLATZ17 and GhiPLATZ22, zinc-dependent DNA-binding transcription factors, promote salt tolerance in upland cotton
    Abdul Rehman, Chunyan Tian, Xiawen Li, Xiaoyang Wang, Hongge Li, Shoupu He, Zhen Jiao, Abdul Qayyum, Xiongming Du, Zhen Peng
    Plant Cell Reports.2024;[Epub]     CrossRef
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    Dongwei Xie, Jing Li, Wan Li, Lijun Sun, Zhigang Dai, Wenzhi Zhou, Jianguang Su, Jian Sun
    Journal of Integrative Agriculture.2024; 23(3): 795.     CrossRef
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    Marie Baucher, Claire Guérin, Mondher El Jaziri, Marc Behr
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  • Identification and Functional Characterization of Abiotic Stress Tolerance-Related PLATZ Transcription Factor Family in Barley (Hordeum vulgare L.)
    Kangfeng Cai, Xiujuan Song, Wenhao Yue, Lei Liu, Fangying Ge, Junmei Wang
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    Xiaoyue Zhang, Yangang Lan, Linna Wang, Hongxia Liu, Nianqin Jiang, Wei He, Hanwei Yan, Min Wu, Yan Xiang
    International Journal of Biological Macromolecules.2023; 248: 125959.     CrossRef
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    Jiuyang Li, Yongliang Zhao, Yaohui Zhang, Feng Ye, Zhengcun Hou, Yuhang Zhang, Longjie Hao, Guofang Li, Jianzhu Shao, Ming Tan
    BMC Genomics.2023;[Epub]     CrossRef
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    Sampath Kumar Banoth, Harsh Chauhan
    Journal of Plant Growth Regulation.2023; 42(11): 7294.     CrossRef
  • Identification of PLATZ genes in Malus and expression characteristics of MdPLATZs in response to drought and ABA stresses
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    Frontiers in Plant Science.2023;[Epub]     CrossRef
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    Antt Htet Wai, Md Mustafizur Rahman, Muhammad Waseem, Lae-Hyeon Cho, Aung Htay Naing, Jong-Seong Jeon, Do-jin Lee, Chang-Kil Kim, Mi-Young Chung
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    BMC Plant Biology.2022;[Epub]     CrossRef
  • Genome-Environment Association Analysis for Bio-Climatic Variables in Common Bean (Phaseolus vulgaris L.) from Brazil
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  • Integrative analysis of metabolome and transcriptome reveals molecular regulatory mechanism of flavonoid biosynthesis in Cyclocarya paliurus under salt stress
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    Industrial Crops and Products.2021; 170: 113823.     CrossRef
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    H. Busra Cagirici, Hikmet Budak, Taner Z. Sen
    Scientific Reports.2021;[Epub]     CrossRef
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  • 27 Crossref