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Volume 5(2); June 2017

Review Article

Current Status and Future Prospects of Soybean Production in Kazakhstan
Akbota Makulbekova, Ayup Iskakov, Krishnanand P. Kulkarni, Jong Tae Song, Jeong-Dong Lee
Plant Breed. Biotech. 2017;5(2):55-66.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.55

Kazakhstan is an agrarian country with 270 million hectares utilized for animal and crop production. The foremost
objective
of the state agriculture programs in Kazakhstan is to achieve food security of country on the basis of competitive crop production. Demand for soybean as an oil crop and animal feed is steadily growing in Kazakhstan and hence soybeans can be a great attribute for food security in this region. Currently, over 90% of all soybean production is concentrated in one region (Almaty) because the crop is highly sensitive to photoperiod and temperature. The climatological conditions in majority of the region pose difficulties in growing the soybeans. In this review, we discussed the impact of the geographical and environmental conditions in enhancing the soybean cultivation in different parts of Kazakhstan. Additionally, we have taken an account of current status of soybean production and the barriers that may have great influence on the soybean yield. Because soybean is a short-day plant, the main role in its adaptation to areas in Kazakhstan is played by its E genes (maturity and flowering genes), the exploitation of which constitutes the primary challenge for the expansion of soybean cultivation. Besides, we have proposed candidate regions for soybean expansion, including Almaty, Zhambyl (south), East Kazakhstan and Kostanay (north). Expanding soybean production in Kazakhstan and in Central Asia could be addressed using competitive education, application of modern scientific methods and cutting-edge breeding technologies, appropriate financing, and productive strategies to develop superior cultivars with tolerance to abiotic stresses.

Citations

Citations to this article as recorded by  
  • Innovative nutrient management practices for soybean production in southern Kazakhstan
    Rakymzhan Yerkuatov, Dossymbek Sydyk, Serik Kenenbayev, Sagadat Turebayeva, Alima Kazybaeva, Aziz Nurbekov, Mirzoxid Raximov, Botir Khaitov
    Frontiers in Sustainable Food Systems.2026;[Epub]     CrossRef
  • ИЗЕННІҢ (BASSIA PROSTRATA) ЗИЯНКЕС БӨЖЕКТЕРІНЕ ҚАРСЫ ФУМИГАНТТАРДЫҢ БИОЛОГИЯЛЫҚ ТИІМДІЛІГІН БАҒАЛАУ
    Гүлайша  Әбдраманова, Меруерт Қанатова , Мөлдір Алимкулова
    Izdenister natigeler.2025; (4 (108)): 213.     CrossRef
  • ВЫЯВЛЕНИЕ ALTERNARIA DESTRUENS НА СОЕ В ЛЕСОСТЕПНОЙ ЗОНЕ СЕВЕРНОГО КАЗАХСТАНА И ИДЕНТИФИКАЦИЯ ГРИБА
    Чингиз Канапин , Ерлан Утельбаев, Кажимурат Мусынов , Нуреттин Тахсин
    Izdenister natigeler.2025; (2 (106)): 345.     CrossRef
  • ӘР ТҮРЛІ СУҒАРУ ЖАҒДАЙЫНДА МАЙБҰРШАҚ СОРТҮЛГІЛЕРІНІҢ ӨНІМДІЛІК БЕЛГІЛЕРІН АНЫҚТАУ
    Джансулу Есенбаева, Айсулу Жолдасбаева
    Izdenister natigeler.2024; (1 (101)): 84.     CrossRef
  • SCREENING OF NEW SOYBEAN CULTIVARS AND CULTIVAR SAMPLES TOWARDS COMMON DISEASES IN KAZAKHSTAN
    A. D. Maylenbai, N. D. Kurymbaeva, G. Sh. Yskakova, M. Zh. Baigutov, A. M. Asraubaeva, A. S. Rsaliyev
    Biosafety and Biotechnology.2024; (14): 52.     CrossRef
  • МАЙБҰРШАҚ ЕГІСТІГІ ЖАҒДАЙЫНДА КӘДІМГІ СҰР ТОПЫРАҚТАРДЫҢ ЫЛҒАЛ ҚОРЫ ЖӘНЕ СУ- ФИЗИКАЛЫҚ ҚАСИЕТТЕРІНЕ СУАРУ РЕЖИМІН ОҢТАЙЛАНДЫРУДЫҢ ӘСЕРІ
    Маусымжан Бейсенбаева , Айгул Жаппарова , Досымбек Сыдық , Карлыга Караева , Майра Кусаинова , Арайлы Закиева
    Izdenister natigeler.2024; (3(103)): 123.     CrossRef
  • СУАРУ ЖӘНЕ МИНЕРАЛДЫҚ ҚОРЕКТЕНДІРУ РЕЖИМДЕРІН РЕТТЕУДІҢ МАЙЛЫ ДАҚЫЛДАРДЫҢ ШАРУАШЫЛЫҚ-ҚҰНДЫ БЕЛГІЛЕРІНІҢ ҚАЛЫПТАСУЫ МЕН ӨНІМДІЛІГІНЕ ӘСЕРІ
    Маусымжан Бейсенбаева , Айгул Жаппарова , Досымбек Сыдық , Карлыга Караева , Асхат Наушабаев , Айсұлу Абдуова
    Izdenister natigeler.2024; (3(103)): 197.     CrossRef
  • Physicochemical, Sensory, and Microbiological Analysis of Fermented Drinks Made from White Kidney Bean Extract and Cow’s Milk Blends during Refrigerated Storage
    Ibaratkan Kurbanova, Lina Lauciene, Kristina Kondrotiene, Gintare Zakariene, Vitalijs Radenkovs, Sandra Kiselioviene, Alvija Salaseviciene, Agne Vasiliauskaite, Mindaugas Malakauskas, Mukarama Musulmanova, Loreta Serniene
    Microorganisms.2024; 12(9): 1832.     CrossRef
  • Genetic Diversity Analysis of Soybean Collection Using Simple Sequence Repeat Markers
    Alibek Zatybekov, Moldir Yermagambetova, Yuliya Genievskaya, Svetlana Didorenko, Saule Abugalieva
    Plants.2023; 12(19): 3445.     CrossRef
  • Effect of Population Size on Genome-Wide Association Study of Agronomic Traits in Soybean
    Alibek Zatybekov, Yerlan Turuspekov, Botakoz Doszhanova, Svetlana Didorenko, Saule Abugalieva
    Proceedings of the Latvian Academy of Sciences. Section B. Natural, Exact, and Applied Sciences..2020; 74(4): 244.     CrossRef
  • A study of the genetic diversity in the world soybean collection using microsatellite markers associated with fungal disease resistance
    A. K. Zatybekov, Y. T. Turuspekov, B. N. Doszhanova, S. I. Abugalieva
    Proceedings on applied botany, genetics and breeding.2020; 181(3): 81.     CrossRef
  • Nutritional Benefit of Soybean and Its Advancement in Research
    Anupam Saha, Suprodip Mandal
    Sustainable Food Production.2019; 5: 6.     CrossRef
  • 65 View
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  • 12 Crossref
Research Articles
Phenotypic Stability for Selected Traits of Some Cowpea Lines in Nigerian Agro-ecologies
Mohammed F. Ishiyaku, Victoria M. Yilwa, Bir B. Singh, Olusoji O. Olufajo, Aminu A. Zaria
Plant Breed. Biotech. 2017;5(2):67-77.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.67

Eight advanced breeding lines of cowpea [Vigna unguiculata (L.) Walp.] were evaluated in a multi-environment trial for phenotypic stability of grain yield, maturity and grain size. There was highly significant genotype × environment interaction for all traits. Simple correlation coefficient was computed to ascertain the level of relationship between stability parameters and agronomic traits. Line IT93K-452-1 was identified as most stable genotype and can be grown all over the Nigerian cowpea belt. The line IT90K-503-1 was the most unstable genotype in terms of grain yield and was also nonresponsive to the environment. However, it is environment specific. IT93K-452-1 has relatively stable maturity across environments. The result suggests that IT93K-452-1 will mature around the average of 65 days irrespective of the location in Nigeria. Lines IT95K-1455 and IT90K-503-1, whose stability parameter values were high, means that in respect of maturity, they are photo-thermo sensitive. They can mature early or delayed depending on the photo-thermal environment. However, lines such as IT93K-273-2-1, IT93K-129-4, IT93K-452-1 and IT86D-719 are photo-thermo insensitive. Line IT93K-1543 was identified as the most desirable genotype in terms of grain size. This is followed by IT93K-452-1. The line IT90K-503-1 had small but unstable seed size. This work identified IT93K-452-1 and IT93K-273-2-1 as the most stable genotypes for yield and maturity. Grain yield was highly positively correlated with bi and R2 but was negatively correlated with Sd2i. Maturity was negatively highly correlated with bi, Wi, and CVi. Grain size on the other hand is not correlated with any of the parameters.

Citations

Citations to this article as recorded by  
  • Genotype x environment interaction effect on grain yield of cowpea (Vigna unguiculata (L.) Walp) in Deciduous forest and Sudan savanna ecologies of Ghana
    Francis Kusi, Richard Adu Amoah, Patrick Attamah, Shaibu Alhassan, Damba Yahaya, Justice Frederick Awuku, Jerry A. Nbonyine, Isaac Amegbor, Gloria Mensah, Issah Sugri, Mukhtaru Zakaria, Salim Lamini, Peter Asungre, Emmanuel Asibi Aziiba, Julius Yirzagla,
    PLOS ONE.2025; 20(1): e0314464.     CrossRef
  • Heritability and expression of yield and yield components in cowpea, an underutilized crop in Africa
    Milcah Bogaleng Matjeke, Maryke Tine Labuschagne, Abe Shegro Gerrano, Adré Minnaar-Ontong, Ntombokulunga Wedy Mbuma
    Frontiers in Sustainable Food Systems.2025;[Epub]     CrossRef
  • Genetic variability, inter-character correlation, and stability performance in cowpea for drought tolerance
    Olakunle Opeyemi Sansa, Omolayo Johnson Ariyo, Monininuola Adefolake Ayo-Vaughan, Ukoabasi Okon Ekanem, Solomon Okon Ntukidem, Michael Terrance Abberton, Olaniyi Ajewole Oyatomi
    Journal of Crop Improvement.2025; 39(1): 43.     CrossRef
  • Registration of ‘UAM15-2157-4’ cowpea cultivar combining high yield and market demand traits for the savanna regions of West Africa
    L. O. Omoigui, G. Ekeruo, A. S. Shaibu, A. Y. Kamara, T. Iorlamen, O. O. Olufajo, O. B. Eseigbe, R. Solomon, M. S. Ugbaa, M. P. Timko
    Genetic Resources and Crop Evolution.2025; 72(S1): 353.     CrossRef
  • AMMI and GGE biplot analysis of genotype by environment interaction and yield stability in early maturing cowpea [Vigna unguiculata (L) Walp] landraces in Ethiopia
    Yirga Kindie, Bulti Tesso, Berhanu Amsalu
    Plant-Environment Interactions.2022; 3(1): 1.     CrossRef
  • Genotype by environment interaction and yield stability of cowpea (Vigna unguiculata (L.) Walp.) genotypes in moisture limited areas of Southern Ethiopia
    Yasin Goa, Hussein Mohammed, Walelign Worku, Elias Urage
    Heliyon.2022; 8(3): e09013.     CrossRef
  • 14 View
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Construction and Efficiency of Selection Indices in Wheat (Triticum aestivum L.) under Drought Stress and Well-Irrigated Conditions
Lalehzar Ghaed-Rahimi, Bahram Heidari, Ali Dadkhodaie
Plant Breed. Biotech. 2017;5(2):78-87.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.78

Aggregate selection helps making selection decisions for improved profitability and permits to exploit information on correlated traits to improve accuracy. In the present study, the efficiency of trait selection was assessed by the Smith-Hazel (SHI) and the Pesek-Baker (PBI) models in 35 wheat genotypes under drought stress at heading and well-irrigated conditions at the Research Farm of Shiraz University, Iran in 2011 and 2012 years. The analysis of correlated response (CR) revealed that thousand grain weight (TGW) with CR = 24.05 (in 2011) and 9.15 (in 2012) and harvest index (HI) with CR = 18.37 (in 2011) and 9.08 (in 2012) had higher indirect effects on grain yield (GY) increase under drought stress. In both years, biological yield (BY), grain number/spike (GN), TGW, and GY had the highest genetic gain (ΔG) in SHI model. The top ten landraces in PBI for the trials in 2011 were also placed in the top rankings for grain yield under drought stress conditions. These results and estimation of the efficiency of selection (ΔH) revealed that PBI (ΔH = 19.95 and 16.5 in the first and 11.15 and 11.06 in the second year) was more efficient than SHI (ΔH = 9.58 and 8.97 in the first and 9.74 and 8.59 in the second year) in view of identifying superior genotypes based on aggregate trait selection. Overall, repeatability estimates for grain yield (33%–57.8%) was relatively low showing that individual plant selection has low efficiency for wheat improvement whilst aggregate trait selections leads to relatively high genetic gain (1.63–2.75) for grain yield.

Citations

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  • Integrating Spatial Models and Multivariate Indices for Oil Palm (Elaeis guineensis Jacq.) Ortet Selection
    Fathur Rachman, Triningsih, Yuli Setiawati, Yurna Yenni
    IOP Conference Series: Earth and Environmental Science.2026; 1631(1): 012049.     CrossRef
  • WHEAT STABILITY ASSESSMENT FOR LATE-PLANTING HEATSTRESS USING STRESS SELECTION INDICES, PRINCIPAL COMPONENT, AND BIPLOT ANALYSES
    Z Ahmed, N.U. Khan, S Gul, S.U. Khan, S Ahmed, S Ali, N Ali, S.A. Khan, M Amin, A Iqbal, W Ali, K Din, A Khan
    The Journal of Animal and Plant Sciences.2025; (6): 1648.     CrossRef
  • Yield Stability and Quality of Wheat (Triticum spp.) and Barley (Hordeum Vulgare) Populations Evolving under Different Microenvironments: A review
    Amal Al-Khatib, Omar Kafawin, Stefania Grando
    Jordan Journal of Agricultural Sciences.2023; 19(1): 89.     CrossRef
  • Evaluation of Cowpea Landraces under a Mediterranean Climate
    Efstathia Lazaridi, Penelope J. Bebeli
    Plants.2023; 12(10): 1947.     CrossRef
  • Assessing genetic diversity and aggregate genotype selection in a collection of cumin (Cuminum cyminum L.) accessions under drought stress: Application of BLUP and BLUE
    Azin Archangi, Ghasem Mohammadi-Nejad, Bahram Heidari
    Scientia Horticulturae.2022; 299: 111028.     CrossRef
  • Comparison of Desired-Genetic-Gain Selection Indices in Late Generations as an Insight on Superior-Family Formation in Bread Wheat (Triticum aestivum L.)
    Rasha Ezzat Mahdy, Zaharh M. A. Althagafi, Rasha M. Al-Zahrani, Hanan H. K. Aloufi, Reem A. Alsalmi, Amany H. A. Abeed, Ezzat Elsayed Mahdy, Suzan A. Tammam
    Agronomy.2022; 12(8): 1738.     CrossRef
  • Application of selection indices in the context of the winter wheat breeding program
    M. Ye. Batashova, V. M. Tyshchenko, M. V. Dubenets, O. M. Shapochka
    Faktori eksperimental'noi evolucii organizmiv.2020; 27: 35.     CrossRef
  • Efficiency of Index-Based Selection Methods for Stem Borer Resistance in Maize (Zea mays L.)
    Qudrah Olaitan Oloyede-Kamiyo
    Journal of Crop Science and Biotechnology.2019; 22(3): 205.     CrossRef
  • 11 View
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  • 8 Crossref
Cross Species Amplification of Cowpea Derived Unigene-SSR Markers and Diversity Analysis in Black Gram [Vigna mungo (L.) Hepper]
Jegadeesan Souframanien, Sudhir Kumar Gupta, Kandali Srinivasulu Reddy
Plant Breed. Biotech. 2017;5(2):88-96.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.88

Black gram [Vigna mungo (L.) Hepper] is an important legume crop in Asia, where it is a major source of dietary protein for its predominantly vegetarian population. Molecular breeding programme in this crop has made little progress due to lack of genomic resources. It largely depends on the sequence information available in the closely related taxa. Ninety-six cowpea derived unigene-SSR markers were tested for their cross species amplification in black gram. Forty-nine unigene-SSR primers showed cross species amplification and diversity among 42 black gram accessions were studied. Each unigene-SSR marker detected two to five alleles and 49 SSR primers collectively amplified 119 alleles in black gram with an average of 2.4 alleles/locus. The polymorphic information content (PIC) of the unigene-SSR markers ranged from 0.05 to 0.72 with an average of 0.41. Cluster analysis based on neighbor-joining method grouped the 42 accessions into three major clusters. The genetic closeness among the cultivars can be explained by the high degree of commonness in their pedigree. These unigene-SSR markers were also successful in detecting variation among 15 gamma ray induced mutants of black gram included in the present investigation. Functional categorization of these unigene-SSR markers corresponded to many genes with biological, cellular and molecular functions, and hence offers an opportunity to investigate the consequences of SSR polymorphism on gene functions and serves as valuable resource for black gram genetic analysis.

Citations

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  • Genetic Dissection of Genomic Regions Associated with Resistance to Urdbean Leaf Crinkle Disease and Yield Related Traits in Black Gram (Vigna mungo (L.) Hepper)
    Bala Barathi Modugula, Ratna Babu Didla
    Plant Molecular Biology Reporter.2025; 43(2): 723.     CrossRef
  • Morphological and molecular characterization of cowpea (Vigna unguiculata L. Walp.) genotypes
    C.G. Patel, P.T. Patel, D.T. Dharajiya, A.B. Patel, H.N. Zala, A.B. Khatri, K.K. Tiwari
    Genetika.2022; 54(2): 633.     CrossRef
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  • 2 Crossref
Biochemical Responses of Soybean (Glycine max L. Merr.) to Proton Beam Irradiation
Juhyun Im, Jonghan Ko, Han-Yong Kim, Bo-Keun Ha
Plant Breed. Biotech. 2017;5(2):97-105.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.97

The present study evaluated the biochemical effects of proton beam irradiation in soybean. Seeds of two Korean elite cultivars (Kwangan and Pungsannamul) were irradiated by a 57-MeV proton beam in the range of 50–400 Gy. We measured the contents of malondialdehyde (MDA), antioxidant enzymes, and chlorophyll. MDA contents in proton beam-irradiated plants were higher than those in control plants. The activity of antioxidant enzymes differed between the two cultivars. In Kwangan, ascorbate peroxidase (APX) activity increased by 29% relative to the control at 55 Gy and decreased by 58% at 308 Gy. Superoxide dismutase (SOD) and peroxidase (POD) activities decreased by 47 and 25% relative to the control at 55 Gy and recovered to 87 and 56% of that at 55 Gy with 172 Gy and 117 Gy, respectively. In Pungsannamul, APX and SOD decreased by 32 and 35% relative to the control at 62 Gy, with the highest value observed at 243 Gy. In terms of the chlorophyll content, the two varieties responded similarly to proton beam irradiation, whereas in Kwangan, no significant reduction was observed above 100 Gy when compared with the control. Proton beam irradiation affected chlorophyll b more than chlorophyll a. These results show that the activity of antioxidant enzymes decreased in response to irradiation with approximately 50 Gy proton beams, then increased gradually with increasing doses, followed by a moderate decrease at higher doses. According to correlation with MDA contents and antioxidant enzyme activities, defense system of Pungsannamul was less activated by proton-beam irradiation than that of Kwangan.

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  • Growth and biological responses of soybean cultivars to gamma-ray and electron beam irradiation
    Jeong Woo Lee, Jung Min Kim, Dae June Kim, Jin-Mun Yun, Jin-Baek Kim, Min Jeong Hong, Chan Seop Ko, Joon-Woo Ahn, Bo-Keun Ha, Soon-Jae Kwon
    International Journal of Radiation Biology.2026; 102(5): 520.     CrossRef
  • Morpho-anatomical and biochemical plasticity of chia (Salvia hispanica L.) microgreens following heavy-ion seed irradiation
    Sara De Francesco, Chiara Amitrano, Ermenegilda Vitale, Walter Tinganelli, Marco Durante, Stefania De Pascale, Carmen Arena, Veronica De Micco
    Plant Physiology and Biochemistry.2026; 237: 111517.     CrossRef
  • Identification and quantification of soybean 11S and 7S globulins using RP-UPLC
    Eun-Seo Cho, Sewon Kim, Jung-Kyung Moon, Soo-Kwon Park, Nobuyuki Maruyama, Shaodong Wang, Chang-Hoon Lee, Jong-Yeol Lee
    Food Chemistry.2025; 473: 143019.     CrossRef
  • Harnessing Light Wavelengths to Enrich Health-Promoting Molecules in Tomato Fruits
    Bruno Hay Mele, Ermenegilda Vitale, Violeta Velikova, Tsonko Tsonev, Carolina Fontanarosa, Michele Spinelli, Angela Amoresano, Carmen Arena
    International Journal of Molecular Sciences.2025; 26(12): 5712.     CrossRef
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    Stefany Castaldi, Christian Lorenz, Ermenegilda Vitale, Lucia Santorufo, Rachele Isticato, Carmen Arena
    Plant and Soil.2025; 507(1-2): 475.     CrossRef
  • Ion-Exchanged Clinoptilolite as a Substrate for Space Farming
    Yuri Kalvachev, Ermenegilda Vitale, Carmen Arena, Totka Todorova, Daniel Ilkov, Violeta Velikova
    Agriculture.2024; 14(3): 350.     CrossRef
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    Lacramioara Oprica, Gabriela Vochita, Marius-Nicușor Grigore, Sergey Shvidkiy, Alexander Molokanov, Daniela Gherghel, Anda Les, Dorina Creanga
    Plants.2023; 12(4): 842.     CrossRef
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    Si-Yong Kang
    Korean Journal of Breeding Science.2023; 55(2): 110.     CrossRef
  • Iodine Enhances the Nutritional Value but Not the Tolerance of Lettuce to NaCl
    Giuseppe Maglione, Ermenegilda Vitale, Giulia Costanzo, Franca Polimeno, Carmen Arena, Luca Vitale
    Horticulturae.2022; 8(7): 662.     CrossRef
  • Ionizing Radiation: Effective Physical Agents for Economic Crop Seed Priming and the Underlying Physiological Mechanisms
    Jiaqi Wang, Yixin Zhang, Libin Zhou, Fu Yang, Jingpeng Li, Yan Du, Ruiyuan Liu, Wenjian Li, Lixia Yu
    International Journal of Molecular Sciences.2022; 23(23): 15212.     CrossRef
  • The Interplay between Light Quality and Biostimulant Application Affects the Antioxidant Capacity and Photosynthetic Traits of Soybean (Glycine max L. Merrill)
    Ermenegilda Vitale, Violeta Velikova, Tsonko Tsonev, Ida Ferrandino, Teresa Capriello, Carmen Arena
    Plants.2021; 10(5): 861.     CrossRef
  • Radio Sensitivity of Cowpea Plants after Gamma-Ray and Proton-Beam Irradiation
    Ryulyi Kang, Eunju Seo, Gyutae Kim, Aron Park, Woon Ji Kim, Si-Yong Kang, Bo-Keun Ha
    Plant Breeding and Biotechnology.2020; 8(3): 281.     CrossRef
  • Impact of Proton Beam Irradiation on the Growth and Biochemical Indexes of Barley (Hordeum vulgare L.) Seedlings Grown under Salt Stress
    Lacramioara Oprica, Marius-Nicusor Grigore, Iulia Caraciuc, Daniela Gherghel, Cosmin-Teodor Mihai, Gabriela Vochita
    Plants.2020; 9(9): 1234.     CrossRef
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    Juhyun Im, Jaihyunk Ryu, Woon Ji Kim, Sang Hun Kim, Si-Yong Kang, Bo-Keun Ha
    Plant Breeding and Biotechnology.2018; 6(2): 109.     CrossRef
  • Molecular characterization of proton beam-induced mutations in soybean using genotyping-by-sequencing
    Woon Ji Kim, Jaihyunk Ryu, Juhyun Im, Sang Hun Kim, Si-Yong Kang, Jeong-Hee Lee, Sung-Hwan Jo, Bo-Keun Ha
    Molecular Genetics and Genomics.2018; 293(5): 1169.     CrossRef
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Characterization of Post-Rainy Season Grown Indigenous and Exotic Germplasm Lines of Sorghum for Morphological and Yield Traits
Ashok Badigannavar, A. Ashok Kumar, G. Girish, T.R. Ganapathi
Plant Breed. Biotech. 2017;5(2):106-114.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.106

Sorghum is a major staple crop and vital for the marginal farmers in Asian and African countries. Landraces or germplasm lines adapted to biotic and abiotic stresses are the prime source of adaptive traits in the crop breeding programs. In order to assess the genetic variability, 141 exotic germplasm lines and 36 popular varieties were evaluated for eight agro-morphological traits. Wide range of values were observed for grain yield (6.6–124.4 g/plant), seed index (1.5–7.1 g/100 seeds), panicle length (8–44 cm) and panicle width (7.25 cm). High genotypic and phenotypic coefficient of variation was observed for grain yield per plant. The values of broad sense heritability in the sorghum core population ranged from 0.75 to 0.99. Seed weight, days to flowering, panicle width and leaf area were significantly correlated with grain yield (P ≤ 0.01). Seed weight was positively correlated with panicle width (correlation coefficient 0.31), while negatively correlated with panicle length (correlation coefficient −0.15). Cluster analysis resolved all the genotypes into four major clusters. Among germplasm lines, TSG-313 had high seed weight of 7.05 g/100 seeds, while TSG-325 had highest grain yield of 124.4 g/plant as against control variety. Germplasm lines with high heritability scores would help us to utilise them in recombination breeding.

Citations

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  • Post-flowering drought stress response of advanced breeding lines and cultivars in post-rainy season sorghum [Sorghum bicolor (L.)] Moench
    S.K. Pooja, Basavaraj Bagewadi, D.P. Biradar, I.S. Katageri, Rakeshkumar S. Choudhary, B. Fakrudin
    South African Journal of Botany.2025; 178: 266.     CrossRef
  • Genetic variability assessment of post‐flowering drought stress tolerance in selected sorghum (Sorghum bicolor L. Moench) genotypes
    Yirgalem Tsehaye, Fetien Abay, Taye Tadesse, Kassahun Bantte, Temesgen M. Menamo
    Agrosystems, Geosciences & Environment.2025;[Epub]     CrossRef
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Mapping QTLs for Leafspot Resistance in Peanut Using SNP-Based Next-Generation Sequencing Markers
Yuya Liang, Michael Baring, Shichen Wang, Endang M. Septiningsih
Plant Breed. Biotech. 2017;5(2):115-122.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.115

Leafspot is one of the major diseases of peanut (Arachis hypogaea L.) that can cause more than 50% yield loss. The
objective
of this study was to identify and map quantitative trait loci (QTLs) for resistance to leafspot disease. An F2:6 recombinant inbred line (RIL) population, derived from a released cultivar Tamrun OL07 and a highly tolerant breeding line Tx964117, were used as a mapping population. A total of 90 RILs were planted for disease phenotyping in Yoakum, Texas in 2010 and 2012. A genetic map spanning the 20 linkage groups was developed using 1,211 SNP markers based on double digest restriction-site associated DNA sequencing (ddRAD-seq). A total of six quantitative trait loci (QTLs) were identified, with LOD score values of 3.2–5.0 and phenotypic variance explained ranging from 11%–24%. Major QTLs identified in this study may be used as potential targets for peanut improvement to leafspot disease through molecular breeding.

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Genome-Wide Identification and Classification of the AP2/EREBP Gene Family in the Cucurbitaceae Species
Sang-Choon Lee, Won-Kyung Lee, Asjad Ali, Manu Kumar, Tae-Jin Yang, Kihwan Song
Plant Breed. Biotech. 2017;5(2):123-133.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.123

AP2/EREBP gene family consists of transcription factor genes with a conserved AP2 DNA-binding domain and is involved in various biological processes. AP2/EREBP gene families were identified through genome-wide searches in five Cucurbitaceae species including cucumber, wild cucumber, melon, watermelon, and bitter gourd, which consisted of more than 100 genes in each of the five species. The gene families were further divided into five groups including four subfamilies (ERF, DREB, AP2 and RAV) and a soloist group. Among the subfamilies, DREB subfamily which is known to be related to abiotic stress response was more analyzed and a total of 25 genes were identified as Cucurbitaceae homologues of Arabidopsis CBF/DREB1 genes which are important for abiotic stress-response and tolerance. In silico expression profiling using RNA-Seq data revealed diverse expression patterns of cucumber AP2/EREBP genes. AP2/EREBP gene families identified in this study will be valuable for understanding the stress response mechanism as well as facilitating molecular breeding in Cucurbitaceae crops.

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    BMC Genomics.2020;[Epub]     CrossRef
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High-Throughput Development of Polymorphic Simple Sequence Repeat Markers Using Two Whole Genome Sequence Data in Peucedanum japonicum
Junki Lee, Ho Jun Joh, Nam-Hoon Kim, Sang-Choon Lee, Woojong Jang, Beom Soon Choi, Yeisoo Yu, Tae-Jin Yang
Plant Breed. Biotech. 2017;5(2):134-142.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.134

Resource plants are important and have strong potential for a variety of utilities as crops or pharmaceutical materials. However, most resource plants remain wild and thus their utility for breeding and biotechnology is limited. Molecular markers are useful to initiate genetic study and molecular breeding for these understudied resource plants. We collected various wild collections of Peucedanum japonicum which is indigenous resource plants utilized as oriental medicine and leafy vegetables in Korea. In this study, we produced two independent whole genome sequences (WGSs) from two collections and identified large scale polymorphic simple sequence repeat (pSSR) based on our pipeline to develop SSR markers based on comparison of two WGSs. We identified a total of 452 candidate pSSR contigs. To confirm the accuracy and utility of pSSR, we designed ten SSR primer pairs and successfully applied those to seven collections of P. japonicum. The WGS and pSSR candidates identified in this study will be useful resource for genetic research and breeding purpose for the valuable resource plant, P. japonicum.

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