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"Bo-Keun Ha"

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"Bo-Keun Ha"

Research Articles
Comparative Analysis of Gene Expression Related to Salt Tolerance with Sorghum (Sorghum bicolor L. Moench) Mutants
Ji Su Seo, Jae Il Lyu, Jung Min Kim, Nguyen Ngoc Hung, Joon-Woo Ahn, Chang Soo Kim, Bo-Keun Ha, Soon-Jae Kwon
Plant Breed. Biotech. 2022;10(2):128-138.   Published online June 1, 2022
DOI: https://doi.org/10.9787/PBB.2022.10.2.128

Sorghum is the fifth most important grain crop worldwide. It is not only used as food and feed, but also as a resource for biofuel production. In addition, it has potential uses as a model plant for research on adaptation to environmental stress. In this study, mutant sorghum lines were generated by gammy ray irradiation. Ten of the M6 sorghum mutant lines were selected from 28 mutant lines on the basis of agronomic characteristics. These 10 lines, along with their original accessions/cultivar, were evaluated to determine the germination rate and the shoot and root length under salt treatment. Compared with their original accessions, three mutant lines (B5, SY6, and SY7) showed significant differentiation under saline conditions (150 mM NaCl), with increased shoot length (by 1.3-2.2 times) and root length (by 1.5-2.5 times). We determined the transcript levels of 20 abiotic stress-responsive genes in B5 (the most salt-tolerant mutant) and its original accession. These genes included those encoding heat shock proteins, aquaporins, ROS scavenging system, and transcription factors. In the B5 mutant, 15 genes showed differences in transcript levels between the control and the salt treatment. Salt treatment resulted in significant up-regulation of Sb03g045840 and down-regulation of Sb3g030750 in the B5 mutant. Here, we reported a simple method to identify genes related to salt tolerance in a sorghum mutant.

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  • Alteration of gene expression profiles in the mutant line of Sorghum bicolor
    Sehyun Choi, Ji-Su Seo, Joon-Woo Ahn, Soon-Jae Kwon, Donghyun Jeon, Changsoo Kim
    Journal of Crop Science and Biotechnology.2023; 26(5): 537.     CrossRef
  • Deciphering the Genetic Mechanisms of Salt Tolerance in Sorghum bicolor L.: Key Genes and SNP Associations from Comparative Transcriptomic Analyses
    Donghyun Jeon, Jin-Baek Kim, Beum-Chang Kang, Changsoo Kim
    Plants.2023; 12(14): 2639.     CrossRef
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Development of a Simple Enzymatic Method for Screening Sucrose Content in Legume Seeds
Gyutae Kim, Aron Park, Woon Ji Kim, Chang Yeok Moon, Byeong Hee Kang, Seong-Hoon Kim, Yu-Mi Choi, Bo-Keun Ha
Plant Breed. Biotech. 2021;9(3):250-258.   Published online September 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.3.250

The soluble sugar content of legume seeds affects the final flavor of the legume and legume products. The purpose of this study was to develop a rapid, simple, and low-cost colorimetric method for high-throughput screening of sucrose content in legume seeds. This colorimetric method was based on the enzymatic reactions of invertase (INV) and glucose oxidase (GOD). Briefly, 20 different soybean and cowpea varieties were used in this study. For sucrose extraction, solvent-to-sample ratios of 10:1 and 5:1 were found to result in optimal absorbance values for determining sucrose content in soybean and cowpea, respectively. The extraction efficiency was also evaluated under various extraction temperatures (25℃ and 50℃) and incubation times (15 minutes, 2 hours, 8 hours, and 24 hours) and the sucrose content was found to increase with increasing temperature and time. Accordingly, the optimal extraction conditions were 24 hours of incubation at 50℃. Under this condition, the GOD/INV method had significant positive correlations (r = 0.91** for soybean and r = 0.87** for cowpea) with the high-performance liquid chromatography method. Overall, this colorimetric method is a fast, simple, and inexpensive tool for quantitative determination of sucrose content in legumes.

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  • Mapping the Genetic Architecture of Tofu Quality Traits in Korean Soybean
    Kishor D.S., Jiyoung Jung, Ji-Min Kim, Taeklim Lee, Seokjin Roh, Yoo Jeong Choi, Maeng Seon Kim, Changmi Im, Sungtaeg Kang
    Korean Journal of Breeding Science.2025; 57(4): 419.     CrossRef
  • Screening Germplasms and Detecting Quantitative Trait Loci for High Sucrose Content in Soybean
    Se-Hee Kang, Seo-Young Shin, Byeong Hee Kang, Sreeparna Chowdhury, Won-Ho Lee, Woon Ji Kim, Jeong-Dong Lee, Sungwoo Lee, Yu-Mi Choi, Bo-Keun Ha
    Plants.2024; 13(19): 2815.     CrossRef
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Genome-Wide Association Study for Flowering Time in Korean Cowpea Germplasm
Eunju Seo, Kipoong Kim, Ryulyi Kang, Gyutae Kim, Aron Park, Woon Ji Kim, Hokeun Sun, Bo-Keun Ha
Plant Breed. Biotech. 2020;8(4):413-425.   Published online December 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.4.413

Cowpea is an annual legume crop; although it is an essential food in developing countries, cowpea is now grown worldwide. For the genetic improvement of plants, flowering time is one of the major selection criteria. In general, flowering is regulated by photoperiod and temperature, along with the interaction between environmental factors. In this study, we aimed to investigate the candidate genes associated with flowering time using genome-wide association study (GWAS). To investigate the flowering time-related genes, 384 cowpea germplasms were genotyped with 51,128 single nucleotide polymorphisms (SNPs). The main genetic component of days to flowering (DTF) was analyzed using genome association and prediction integrated tool (GAPIT) and elastic-net analyses. From the GAPIT and elastic-net analyses, a total of 23 SNPs were significantly associated with DTF among five (chr. 2, 3, 7, 9, and 11) and seven (chr. 1, 2, 3, 4, 5, 8, and 9) different chromosomes, respectively. Based on our analysis, Vigun01g084000, Vigun01g227200, Vigun02g062600, and Vigun03g296800 were considered the major candidate genes that were significantly associated with DTF in cowpea. These results confirmed that DTF might be controlled by multiple genes affecting early flowering, delaying flowering time, repressing the transition to flowering, etc. This study will potentially contribute to effective DTF genomic selection in plant breeding to better understand the genetic basis and explore the mechanism of flowering time.

Citations

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  • Genome-wide association studies dissect the genetic architecture of seed and yield component traits in cowpea (Vigna unguiculata L. Walp)
    Habib Akinmade, Rebecca Caroline Ulbricht Ferreira, Mario Henrique Murad Leite Andrade, Claudio Fernandes, Pablo Sipowicz, María Muñoz-Amatriaín, Esteban Rios, T Jamann
    G3: Genes, Genomes, Genetics.2025;[Epub]     CrossRef
  • Genome-wide association study of biological nitrogen fixation traits in mini-core cowpea germplasm
    Gelase Nkurunziza, Emmanuel K. Mbeyagala, Emmanuel Amponsah Adjei, Isaac Onziga Dramadri, Richard Edema, Arfang Badji, Rahiel Hagos Abrah, Astere Bararyenya, Kpedetin Ariel Frejus Sodedji, Phinehas Tukamuhabwa, Mildred Ochwo Ssemakula, John Baptist Tumuha
    PLOS One.2025; 20(5): e0322203.     CrossRef
  • Elucidating the genomic regions through genome-wide association study (GWAS) for root traits in cowpea (Vigna unguiculata (L) Walp) mini-core collection
    Aaqif Zaffar, Rajneesh Paliwal, Michael Abberton, Sabina Akhtar, Rafiq Ahmad Mengnoo, Aamir Nazir Sheikh, Parvaze Ahmad Sofi, Mohd Ashraf Bhat, Reyazul Rouf Mir
    Plant Stress.2024; 12: 100440.     CrossRef
  • Crop Landraces and Indigenous Varieties: A Valuable Source of Genes for Plant Breeding
    Efstathia Lazaridi, Aliki Kapazoglou, Maria Gerakari, Konstantina Kleftogianni, Kondylia Passa, Efi Sarri, Vasileios Papasotiropoulos, Eleni Tani, Penelope J. Bebeli
    Plants.2024; 13(6): 758.     CrossRef
  • New statistical selection method for pleiotropic variants associated with both quantitative and qualitative traits
    Kipoong Kim, Tae-Hwan Jun, Bo-Keun Ha, Shuang Wang, Hokeun Sun
    BMC Bioinformatics.2023;[Epub]     CrossRef
  • Cowpea Constraints and Breeding in Europe
    Efstathia Lazaridi, Penelope J. Bebeli
    Plants.2023; 12(6): 1339.     CrossRef
  • Revisiting the Domestication Process of African Vigna Species (Fabaceae): Background, Perspectives and Challenges
    Davide Panzeri, Werther Guidi Nissim, Massimo Labra, Fabrizio Grassi
    Plants.2022; 11(4): 532.     CrossRef
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Radio Sensitivity of Cowpea Plants after Gamma-Ray and Proton-Beam Irradiation
Ryulyi Kang, Eunju Seo, Gyutae Kim, Aron Park, Woon Ji Kim, Si-Yong Kang, Bo-Keun Ha
Plant Breed. Biotech. 2020;8(3):281-292.   Published online September 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.3.281

Cowpea (Vigna unguiculata (L.) Walp.) is one of the important legume crops in which all stages of plant growth are used in human food and animal feed. In this study, morphological and biochemical changes were investigated in cowpea plants exposed to proton-beams and gamma-rays. ‘Okdang’ cultivar seeds were irradiated with 100, 200, 300, 400, and 500 Gy of gamma-rays and proton-beams. The gamma-ray and proton-beam irradiations significantly delayed emergence period, but had small effects on emer-gence rates. Compared to a control, the proton-beam treatments showed a significant decrease in survival rate above 200 Gy. The gamma-ray treatments significantly reduced survival rate above 300 Gy. The Lethal Dose 50 (LD50) for both irradiations were 200-300 Gy. Plant height and fresh shoot weight tended to decrease with increasing radiation levels. The Reduction Dose 50 (RD50) of plant height was between 100 and 200 Gy for the proton-beam and 200 to 300 Gy for the gamma-ray treatments. The RD50 of fresh shoot weight was expected to be 500 Gy or higher for the proton-beam and gamma-ray treatments. The malonaldehyde (MDA) content in both treatments were slightly decreased at 200 Gy compared to a control, but increased at 300 Gy. Overall, antioxidant enzymes reacted more to proton-beams than to gamma-rays. However, gamma-rays appear to have a greater effect on chlorophyll content than proton-beams. Our research will be valuable as a basic research comparing the mutagenic effects on cowpea induced by two ionizing radiations.

Citations

Citations to this article as recorded by  
  • Refining selection strategies for carbon-ion beam mutagenesis in multiple vegetable species
    Yukun Sheng, Lixia Yu, Wenjie Jin, Ruiyuan Liu, Ying Qu, Xiao Liu, Man Wang, Guisen Kang, Chenan Yang, Jing Long, Jianing Ding, Yan Du, Libin Zhou
    Radiation Physics and Chemistry.2026; 249: 114118.     CrossRef
  • Growth and biological responses of soybean cultivars to gamma-ray and electron beam irradiation
    Jeong Woo Lee, Jung Min Kim, Dae June Kim, Jin-Mun Yun, Jin-Baek Kim, Min Jeong Hong, Chan Seop Ko, Joon-Woo Ahn, Bo-Keun Ha, Soon-Jae Kwon
    International Journal of Radiation Biology.2026; 102(5): 520.     CrossRef
  • Recent Advances in the Application of Ionizing Radiation Techniques in Food Processing: Mechanisms of Action, Practical Applications, and Quality Effects
    Jiaqi Wang, Wenting Wang, Yan Du, Jian Zou, Weifeng Chen, Dequan Wei
    Food and Bioprocess Technology.2026;[Epub]     CrossRef
  • Estimating Genetic Variability and Heritability of Morpho-Agronomic Traits of M5 Cowpea (Vigna unguiculata (L.) Walp) Mutant Lines
    Kelebonye Ramolekwa, Motlalepula Pholo-Tait, Travis Parker, Goitseone Malambane, Samodimo Ngwako, Lekgari Lekgari
    International Journal of Molecular Sciences.2025; 26(15): 7543.     CrossRef
  • Degradation of synthetic reactive Pyrazole-133 dye by using an advanced oxidation process assisted by gamma radiations
    Ghazanfar Abbas, Tanveer Hussain Bokhari, Muhammad Adnan Iqbal, Adnan Majeed, Majid Muneer, Ghulam Hussain, Maham Fatima, Um E. Amara
    Radiation Physics and Chemistry.2025; 229: 112418.     CrossRef
  • Application of ionizing radiation for crop improvement
    Stanislav Geras’kin, Ekaterina Bondarenko, Sofia Bitarishvili
    Planta.2025;[Epub]     CrossRef
  • Cowpea (Vigna unguiculata) Cultivation and Breeding in the Republic of Korea: Advances and Future Perspectives
    Dong-Kwan Kim, Kanivalan Iwar, Kingsley Ochar, Sin-Young Park, Eun-Byul Go, Kyung-Dong Lee, Seong-Hoon Kim
    Agronomy.2024; 14(11): 2679.     CrossRef
  • Genetic Enhancement of Indigenous Cowpea with Gamma-Ray Induced Trait Variation
    Mathurin Tiergnin Dabiré, Minimassom Philippe Nikiéma, Djibril Yonli, Safiatou Sanna, Wossoguim Josué Gouba, Siébou Palé, Hamidou Traoré, Joseph T. B. Batieno, Varra Prasad, Zacharia Stewart, Jan B. Middendorf, Abhishek Rathore, Anupama J. Hingane
    American Journal of Plant Sciences.2024; 15(08): 651.     CrossRef
  • Gamma-rays induced genome wide stable mutations in cowpea deciphered through whole genome sequencing
    Dhanasekar Punniyamoorthy, Jegadeesan Souframanien
    International Journal of Radiation Biology.2024; 100(7): 1072.     CrossRef
  • Plant acclimation to ionising radiation requires activation of a detoxification pathway against carbonyl‐containing lipid oxidation products
    Brigitte Ksas, Serge Chiarenza, Nicolas Dubourg, Véronique Ménard, Rodophe Gilbin, Michel Havaux
    Plant, Cell & Environment.2024; 47(10): 3882.     CrossRef
  • Characteristics and Research Status of Mutation Breeding Using Accelerator Beams
    Si-Yong Kang
    Korean Journal of Breeding Science.2023; 55(2): 110.     CrossRef
  • A Comparison of the Transcriptomes of Cowpeas in Response to Two Different Ionizing Radiations
    Ryulyi Kang, Eunju Seo, Aron Park, Woon Ji Kim, Byeong Hee Kang, Jeong-Hee Lee, Sang Hoon Kim, Si-Yong Kang, Bo-Keun Ha
    Plants.2021; 10(3): 567.     CrossRef
  • Determination of growth and antioxidant activity assay of in vitro gamma-irradiated Tacca leontopetaloides shoots
    A F Martin, B W Hapsari, T M Ermayanti
    IOP Conference Series: Earth and Environmental Science.2021; 741(1): 012021.     CrossRef
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Growth Characteristics and Biological Responses of Korean Elite Soybean (Glycine max L. Merr.) Cultivars Exposed to Gamma-Rays
Juhyun Im, Jaihyunk Ryu, Woon Ji Kim, Sang Hun Kim, Si-Yong Kang, Bo-Keun Ha
Plant Breed. Biotech. 2018;6(2):109-118.   Published online June 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.2.109

The present study was conducted to evaluate the biological responses of soybean irradiated by gamma-rays. Four elite Korean soybean cultivars, Kwangankong, Shinpaldal-2, Shinhwakong, and Ilmikong, were irradiated with 100–400 Gy of gamma-rays. All cultivars showed significant reductions in morphological parameters. Seedling emergence rates of Kwangankong, Shinpaldal-2, Shinhwakong, and Ilmikong decreased by 46%, 31%, 44%, and 43% at 400 Gy, respectively. Plant height and fresh weight decreased with increasing dose. The median reduction dose (RD50) for plant height ranged from 184 to 278 Gy with an average of 212 Gy. The optimal dose of gamma irradiation for inducing mutation in the four elite soybean cultivars was in the range 200–300 Gy. Contents of malonaldehyde (MDA) in the gamma-ray irradiated plants were higher than those in the controls. With the exception of Kwangankong, activities of ascorbate peroxidase (APX) in other cultivars decreased at 100 Gy and started to increase significantly at 200 Gy and Shinhwakong cultivar had highest APX value observed at 300 Gy. No significant changes in peroxidase (POD) activity were observed in the Kwangankong, Shinpaldal-2, and Shinhwakong, while, POD activity increased with increasing dose in Ilmikong. In addition, gamma-ray treatments elicited a marked reduction in chlorophyll a contents compared to chlorophyll b contents in Kwangankong, Shinpaldal-2, and Ilmikong. Growth characteristics (plant height and fresh weight) were highly negatively (P < 0.01) correlated with the dose of gamma-rays, while the MDA content and APX activities were positively (P < 0.05) correlated with dose.

Citations

Citations to this article as recorded by  
  • Growth and biological responses of soybean cultivars to gamma-ray and electron beam irradiation
    Jeong Woo Lee, Jung Min Kim, Dae June Kim, Jin-Mun Yun, Jin-Baek Kim, Min Jeong Hong, Chan Seop Ko, Joon-Woo Ahn, Bo-Keun Ha, Soon-Jae Kwon
    International Journal of Radiation Biology.2026; 102(5): 520.     CrossRef
  • Mutation induction in soybean (Glycine max L.) M.1.1.3 line through gamma irradiation in the M1 generation
    Nilahayati, D Saputra, Neni, Yuliasti
    IOP Conference Series: Earth and Environmental Science.2025; 1490(1): 012040.     CrossRef
  • Stimulating growth parameters by magnetic field in irradiated with gamma radiation soybean varieties
    Name Özdinç, Fehime Sevil Yalçın
    Radiation Effects and Defects in Solids.2025; : 1.     CrossRef
  • Effect of Gamma Irradiation on Survival, Fruit Characteristic, and Thorn Length in Different Varieties of Citrus
    Cheol-Woo Choi, Min-Ju Kim, Seong-beom Jin, Suk-Man Park, Su-Hyun Yun
    Korean Journal of Breeding Science.2023; 55(4): 296.     CrossRef
  • Radio-sensitivity of diverse tomato genotypes with respect to optimization of gamma irradiation dose
    Soham Hazra, Shouvik Gorai, Sudip Bhattacharya, Suvojit Bose, Pranab Hazra, Arup Chattopadhyay, Anirban Maji
    Brazilian Journal of Botany.2022; 45(3): 917.     CrossRef
  • Gamma-ray Irradiation on Radio Sensitivity in Cnidium officinale Makino
    Jin Tae Jeong, Bo Keun Ha, Jong Won Han, Jeong Hoon Lee, Sang Hoon Lee, Myeong Won Oh, Chun Geon Park, Kyung Ho Ma, Jae Ki Chang, Sang Hoon Kim, Jin Baek Kim, Si Yong Kang, Jai Hyunk Ryu
    Korean Journal of Medicinal Crop Science.2020; 28(5): 339.     CrossRef
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Phytochemical Compounds and Antioxidant Activity in the Grain of Selected Faba Bean (Vicia faba) Genotypes
Soon-Jae Kwon, Dong-Gun Kim, Jung Min Kim, Kyung-Yun Kang, Min-Kyu Lee, Min Jeong Hong, Jin-Baek Kim, Seok Hyun Eom, Si-Yong Kang, Bo-Keun Ha, Jaihyunk Ryu
Plant Breed. Biotech. 2018;6(1):65-73.   Published online March 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.1.65

The faba bean produces medicinally useful phenolic compounds naturally, and is also a good source of food and animal feed. This study quantified the functional compounds and antioxidant activities of five faba bean genotypes selected on the basis of their seed yield and L-dopa content. The highest total tannin content (TTC) and total proanthocyanidin content (TPAC) were observed in the PI252004 genotype and the lowest content in the PI366039 genotype. The total phenolics content (TPC) and total flavonoid content (TFC) of the PI430715 genotype were higher than those of the other genotypes. LC-MS analyses identified 22 different phenolic compounds in the faba bean genotypes. The most abundant proanthocyanidin compounds were prodelphinidin and catechin and the predominant flavonols and flavones were myricetin, quercetin, apigenin, kaempferol, and luteolin-free aglycones or glycosides. The TFC was correlated with ferric-reducing antioxidant power activity (FRAP) (P ≤ 0.05), Trolox equivalent antioxidant capacity (TEAC) (P ≤ 0.01), and DPPH radical scavenging activity (P ≤ 0.01). The results indicated that the PI430715 genotype contained the highest TPC and TFC and exhibited the highest FRAP, TEAC and DPPH radical scavenging activities. These results may help determine the optimal genotypes for breeding new cultivars of faba bean with potentially greater health benefits.

Citations

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  • Chemometric Approach to Fatty Acid Composition in Green and Mature Seeds of Selected Faba Bean ( Vicia faba L.) Populations from Serbia
    Violeta Mitic, Jelena Nikolic, Vesna Stankov Jovanovic, Jasmina Milenkovic, Ivana Zlatanovic, Biljana Arsic, Gordana Stojanovic
    Analytical Letters.2026; 59(6): 960.     CrossRef
  • Significant impact of Bacillus licheniformis DW4, Salinicoccus sesuvii DW5 and Paenalcaligenes suwonensis DW7, in mitigation of seawater stress on the growth and productivity of Vicia Faba cultivated in Qalabshu semi-field soil
    Dalia Wael, Yasser El-Amier, WesamEldin I. A. Saber, Ashraf Elsayed
    BMC Plant Biology.2026;[Epub]     CrossRef
  • Structural and phylogenetic insights from complete chloroplast genomes of seven Vicia species
    Mohammad Mehdi Golchini, Aboozar Soorni, Md. Mahmudul Hasan
    PLOS One.2026; 21(3): e0340630.     CrossRef
  • Effects of transglutaminase and thyme oil addition on the properties of faba bean protein-based active films
    Melissa Kocatepe, Kubra Ertan, Serpil Sahin, Gulum Sumnu
    International Journal of Biological Macromolecules.2025; 312: 144178.     CrossRef
  • Unraveling the functional potential of microbial resources and pulse-based matrices for sourdough breadmaking
    Chiara Viretto, Ali Zein Alabiden Tlais, Kashika Arora, Hana Ameur, Fabio Tuccillo, Andrea Polo, Vimac Nolla Ardèvol, Fabienne Verté, Kati Katina, Raffaella Di Cagno, Marco Gobbetti
    Future Foods.2025; 11: 100643.     CrossRef
  • Phytochemical Profiling, Antioxidant Capacity, and α-Amylase/α-Glucosidase Inhibitory Effects of 29 Faba Bean (Vicia faba L.) Varieties from China
    Ying Li, Zhihua Wang, Chengkai Mei, Wenqi Sun, Xingxing Yuan, Jing Wang, Wuyang Huang
    Biology.2025; 14(8): 982.     CrossRef
  • Ethnoknowledge About Vinagreira (roselle) (hibiscus sabdariffa l.) Among residents of Rural Communities in Maranhão, Northeast Brazil
    Osiel César Da Trindade Junior, Edna Maria Ferreira Chaves, Roseli Farias Melo De Barros
    Revista de Gestão Social e Ambiental.2024; 18(3): e04725.     CrossRef
  • Metabolites profiling, in-vitro and molecular docking studies of five legume seeds for Alzheimer’s disease
    Rana M. Ibrahim, Passent M. Abdel-Baki, Osama G. Mohamed, Ahmed A. Al-Karmalawy, Ashootosh Tripathi, Riham A. El-Shiekh
    Scientific Reports.2024;[Epub]     CrossRef
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    Sani Das, Antara Bose, Muktadhar Reang, Badal Kumar Datta
    Discover Plants.2024;[Epub]     CrossRef
  • Bioaccessibility and potential bioactivity of fresh and mature fava bean flavonoids
    D. Sosa De León, L.F. Méndez-López, B.E. González-Martínez, M. López-Cabanillas Lomelí, A.A. López-Hernández, D.A. Luna-Vital, D. Néder-Suárez, J.A. Vázquez-Rodríguez
    Applied Food Research.2024; 4(2): 100523.     CrossRef
  • Antioxidant Activities, Total Phenols, and Proanthocyanidin Changes during Storage of Fourteen Faba Bean ( Vicia faba L.) Populations from Serbia – A Chemometric Approach
    Violeta Mitic, Jelena Nikolic, Snezana Andjelkovic, Mirjana Petrovic, Vesna Stankov Jovanovic, Jasmina Milenkovic
    Analytical Letters.2024; 57(4): 607.     CrossRef
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    Joel B. Johnson, Anatoliy Kazak, Nadezhda Gallini, Marina Rudenko, Mani Naiker
    Chemical Papers.2024; 78(7): 4285.     CrossRef
  • Effects of Different Processing Methods on Pulses Phytochemicals: An Overview
    Jiajing Zhou, Minhao Li, Qian Bai, Thaiza S. P. de Souza, Colin Barrow, Frank Dunshea, Hafiz A. R. Suleria
    Food Reviews International.2024; 40(4): 1138.     CrossRef
  • Heating effect on nutritional value from two morphotypes (palmate and semi-palmate leaves) of Hibiscus sabdariffa
    Antoine Sambou, Nicolas Ayessou, Aly Diallo
    International Journal of Gastronomy and Food Science.2023; 32: 100698.     CrossRef
  • Nutrient Levels, Bioactive Metabolite Contents, and Antioxidant Capacities of Faba Beans as Affected by Dehulling
    Yu-Mi Choi, Hyemyeong Yoon, Myoung-Jae Shin, Sukyeung Lee, Jungyoon Yi, Young-ah Jeon, Xiaohan Wang, Kebede Taye Desta
    Foods.2023; 12(22): 4063.     CrossRef
  • Atmospheric CO2 concentration affects the life cycle, yield, and fruit quality of early maturing edible legume cultivars
    Idoia Garmendia, Sakineh Rashidi, Marilyn RA Quezada‐Salirrosas, Nieves Goicoechea
    Journal of the Science of Food and Agriculture.2022; 102(10): 3964.     CrossRef
  • Vicia plants—A comprehensive review on chemical composition and phytopharmacology
    Bahare Salehi, Ibrahim M. Abu‐Reidah, Farukh Sharopov, Natallia Karazhan, Javad Sharifi‐Rad, Muhammad Akram, Muhammad Daniyal, Fahad Said Khan, Wafa Abbaass, Rida Zainab, Katya Carbone, Nouran M. Fahmy, Eman Al‐Sayed, Mohamed El‐Shazly, Massimo Lucarini,
    Phytotherapy Research.2021; 35(2): 790.     CrossRef
  • L-3,4-dihydroxyphenylalanine Accumulation in Faba Bean (Vicia faba L.) Tissues during Different Growth Stages
    Shucheng Duan, Soon Jae Kwon, You Jin Lim, Chan Saem Gil, Chengwu Jin, Seok Hyun Eom
    Agronomy.2021; 11(3): 502.     CrossRef
  • Impact of gamma radiation on antioxidant activity in faba bean (Vicia faba L.) and the potential of meatballs formulation with inclusion of the powder of irradiated beans
    Aly H. Rady, Abbas O. Toliba, Hesham M. Badr, Amr Kh. Ali
    Journal of Food Science and Technology.2020; 57(8): 2975.     CrossRef
  • Phenolic Compound Content of Leaf Extracts from Different Roselle (Hibiscus sabdariffa) Accessions
    Jae Il Lyu, Jung Min Kim, Dong-Gun Kim, Jin-Baek Kim, Sang Hoon Kim, Joon-Woo Ahn, Si-Yong Kang, Jaihyunk Ryu, Soon-Jae Kwon
    Plant Breeding and Biotechnology.2020; 8(1): 1.     CrossRef
  • In vitro investigation of hypoglycemic and oxidative stress properties of fava bean (Vicia faba L.) seed extract in Saccharomyces cerevisiae 2376
    Dhiraj Kumar Choudhary, Abha Mishra
    Preparative Biochemistry & Biotechnology.2018; 48(10): 920.     CrossRef
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Selection of the Elite Lines with High Adaptability to Autumn Sowing of South Korea in Faba Bean
Min-Kyu Lee, Dong-Gun Kim, Jung Min Kim, Jaihyunk Ryu, Seok Hyun Eom, Min Jeong Hong, Young Eun Jang, Bo-Keun Ha, Soon-Jae Kwon
Plant Breed. Biotech. 2018;6(1):57-64.   Published online March 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.1.57

This study involved an evaluation of agronomic characteristics to identify elite faba bean (Vicia faba L.) lines adapted to the environmental conditions in Korea. A total of 371 accessions were sown in February 2015, and 256 lines among 1,006 individuals were selected based on seed size and color as well as seed yield per plant. Thirty seeds of each line were sown in October 2015 to analyze the winter survival rates and agronomic characteristics. The 129 lines that survived until March were examined based on nine traits, including flowering date, plant height, number of stems, pot length, pot width, seeds per pot, 100-seed weight, seed size and seed color. Finally, ten elite lines were selected according to the winter survival rate, seed size and color, as well as seed yield per plant. Green seeds were observed for four of the selected lines, brown seeds were observed for two lines, and black, purple, and beige seeds were detected in one line each. The average winter survival rate was 74.8%. Moreover, the average plant height and 100-seed weight were 83.5 cm and 10.8 g, respectively. The plants produced an average of 150 seeds. These results will be very useful for autumn-sown of faba bean in South Korea, and ten elite lines will provide great opportunity for faba bean breeding.

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Environmental Stability and Correlation of Soybean Seed Starch with Protein and Oil Contents
Sanjeev K. Dhungana, Krishnanand P. Kulkarni, Minsu Kim, Bo-Keun Ha, Sungtaeg Kang, Jong Tae Song, Dong-Hyun Shin, Jeong-Dong Lee
Plant Breed. Biotech. 2017;5(4):293-303.   Published online December 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.4.293

Seed starch content (SSC) is a decisive factor influencing soy food quality. Variation in SSC affects the composition of major components, oil, and protein in soybean seeds. Therefore, understanding G × E interaction of SSC is important to produce soybeans with stable SSC. In the present study, G × E interactions of 17 soybean genotypes having different SSC (0.24–1.48%) and correlation of SSC with crude protein (CP) and crude fat (CF) were investigated. The genotypes were evaluated for SSC and other traits at two planting dates across three locations over two years (2015 and 2016). The genotype × year, genotype × location, and genotype × year × location interactions were found to be significant (P ≤ 0.001) for SSC, CP, and CF. The average SSC content was found to be higher in 2015 than in 2016. Late planted soybeans contained higher SSC than the early planting soybeans. The SSC was negatively affected by the average daily mean and minimum temperatures and cloudiness during the pod-filling stage. Based on the mean rank, IT189276 (1.39%) was observed to be the most stable genotype among the high starch containing soybeans. Significant (P ≤ 0.0001) negative correlations were found between SSC and CP as well as CP and CF contents. However, a significant (P ≤ 0.05) positive correlation was observed between SSC and CF content. Results of this study showed that SSC affects the seed protein and oil contents and is significantly influenced by the growing environments.

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Study of Transferability of Rubus Microsatellite Markers to Hybrid Boysenberry
Jaihyunk Ryu, Woon Ji Kim, Juhyun Im, Sang Hun Kim, Seung Cheol Oh, Lan Cho, Si-Yong Kang, Bo-Keun Ha
Plant Breed. Biotech. 2017;5(4):253-260.   Published online December 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.4.253

Boysenberry, a Rubus hybrid between loganberry and a trailing blackberry, possesses distinctive polyphenol compounds, which have demonstrated positive biological effects on human health. Several new boysenberry genotypes have recently been developed from mutation breeding technology. In this study, a total of 103 SSR markers developed from expressed sequence tag (EST) and genomic libraries in blackberry and red raspberry were tested for cross-amplifications in 10 boysenberry genotypes. All primer pairs successfully produced amplification products, ranging from 1 to 4 loci per primer. Eleven polymorphic SSR markers (RH_MEa0007aB01, RH_MEa12cE03, RH_MEa14bF07, RH_MEa15aD04, RH_MEa13cF08, ERubLR_SQ01_N03, ERubLR_SQ053_H01, ERubLR_SQ191_A05, RubfruitG7, Rubusr43a, and RiM019) were detected among boysenberry genotypes, while polymorphic loci were not detected in 92 markers. Polymorphism information content (PIC) and genetic diversity (GD) values ranged from 0.160 to 0.580 and from 180 to 0.640, with average values of 0.359 and 0.407, respectively, in the 11 polymorphic markers. According to a cluster analysis, all the mutant boysenberry genotypes can be classified into one category. Although the level of genetic diversity revealed by SSR markers in 10 boysenberry genotypes was low, these SSR markers will be useful for future genetic diversity, cultivar identification, QTL mapping, and gene cloning studies in boysenberry.

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  • Characterization of genetic variation and antioxidant properties in strawberry (Fragaria × ananassa Duch.) mutant genotypes
    Jaihyunk Ryu, Woon Ji Kim, Sang Hun Kim, Kang-Seop Lee, Han-Jig Jo, Ee-Youb Kim, Sang Hoon Kim, Si-Yong Kang, Jeong-Hee Lee, Bo-Keun Ha
    Genetic Resources and Crop Evolution.2020; 67(6): 1457.     CrossRef
  • Single nucleotide polymorphism (SNP) discovery through genotyping-by-sequencing (GBS) and genetic characterization of Dendrobium mutants and cultivars
    Jaihyunk Ryu, Woon Ji Kim, Juhyun Im, Kyung-Won Kang, Sang Hoon Kim, Yeong Deuk Jo, Si-Yong Kang, Jeong-Hee Lee, Bo-Keun Ha
    Scientia Horticulturae.2019; 244: 225.     CrossRef
  • Genotyping-by-sequencing based single nucleotide polymorphisms enabled Kompetitive Allele Specific PCR marker development in mutant Rubus genotypes
    Jaihyunk Ryu, Woon Ji Kim, Juhyun Im, Sang Hun Kim, Kang-Seop Lee, Han-Jig Jo, Ee-Youb Kim, Si-Yong Kang, Jeong-Hee Lee, Bo-Keun Ha
    Electronic Journal of Biotechnology.2018; 35: 57.     CrossRef
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Fruit Quality and Chemical Contents of Hybrid Boysenberry (Rubus ursinus) Lines Developed by Hybridization and Gamma Irradiation
Jaihyunk Ryu, Soon-Jae Kwon, Yeong Deuk Jo, Hong-Il Choi, Kyung-Yun Kang, Bo mi Nam, Dong-Gun Kim, Chang-Hyun Jin, Jin-Baek Kim, Ee-Yup Kim, Seung Cheol Oh, Bo-Keun Ha, Si-Yong Kang
Plant Breed. Biotech. 2017;5(3):228-236.   Published online September 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.3.228

The Rubus fruit is an economically important berry crop that contains various functional compounds. The
objective
of this study was to analyze fruit qualities (i.e., pH, soluble solids content, titratable acidity, and mineral content) as well as fatty acid and phenolic compounds (i.e., ellagic acid and anthocyanins) among hybrid boysenberry lines developed by hybridization and gamma irradiation. There were no significant differences in the hybrid boysenberry fruit pH and titratable acidity (%) among the tested genotypes. However, the soluble solids content was higher in the BSA119 and BSA144 mutants than in the original genotype (BS_Hybrid). Meanwhile, linoleic acid was the most abundant fatty acid in the analyzed hybrid boysenberry fruits. The fatty acid composition did not differ significantly among the genotypes. The ellagic acid content of all genotypes ranged from 8.72 mg/100 g to 46.10 mg/100 g, with the highest concentration observed for the BSB127 genotype. Additionally, cyanidin-3-O-sophoroside (M-H+, 611 m/z) and cyanidin-3-O-glucoside (M-H+, 449 m/z) were the two major anthocyanins detected in the boysenberry and mutant genotypes, while cyanidin-3-O-glucoside was the predominant blackberry anthocyanin. The total anthocyanin concentrations of four mutant genotypes (i.e., BSA036, BSA078, BSA101, and BSB127) were significantly higher than that of the original genotype (382.0 mg/100 g). The highest total anthocyanin concentration was observed for the BSA078 genotype (467.9 mg/100 g). These results may be useful for identifying the optimal genotypes for breeding new cultivars with enhanced qualities and potential health benefits.

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  • Evaluation of Anthocyanin Profiling, Total Phenolic and Flavonoid Content, and Antioxidant Activity of Korean Rubus Accessions for Functional Food Applications and Breeding
    Juyoung Kim, Jaihyunk Ryu, Seung Hyeon Lee, Jae Hoon Kim, Dong-Gun Kim, Tae Hyun Ha, Sang Hoon Kim
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    Maria Cristina Copello Rotili, Fabíola Villa, Daniel Fernandes da Silva, Solivan Rosanelli, Gilberto Costa Braga, Giovana Ritter
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  • Genotyping-by-sequencing based single nucleotide polymorphisms enabled Kompetitive Allele Specific PCR marker development in mutant Rubus genotypes
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    Electronic Journal of Biotechnology.2018; 35: 57.     CrossRef
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Biochemical Responses of Soybean (Glycine max L. Merr.) to Proton Beam Irradiation
Juhyun Im, Jonghan Ko, Han-Yong Kim, Bo-Keun Ha
Plant Breed. Biotech. 2017;5(2):97-105.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.97

The present study evaluated the biochemical effects of proton beam irradiation in soybean. Seeds of two Korean elite cultivars (Kwangan and Pungsannamul) were irradiated by a 57-MeV proton beam in the range of 50–400 Gy. We measured the contents of malondialdehyde (MDA), antioxidant enzymes, and chlorophyll. MDA contents in proton beam-irradiated plants were higher than those in control plants. The activity of antioxidant enzymes differed between the two cultivars. In Kwangan, ascorbate peroxidase (APX) activity increased by 29% relative to the control at 55 Gy and decreased by 58% at 308 Gy. Superoxide dismutase (SOD) and peroxidase (POD) activities decreased by 47 and 25% relative to the control at 55 Gy and recovered to 87 and 56% of that at 55 Gy with 172 Gy and 117 Gy, respectively. In Pungsannamul, APX and SOD decreased by 32 and 35% relative to the control at 62 Gy, with the highest value observed at 243 Gy. In terms of the chlorophyll content, the two varieties responded similarly to proton beam irradiation, whereas in Kwangan, no significant reduction was observed above 100 Gy when compared with the control. Proton beam irradiation affected chlorophyll b more than chlorophyll a. These results show that the activity of antioxidant enzymes decreased in response to irradiation with approximately 50 Gy proton beams, then increased gradually with increasing doses, followed by a moderate decrease at higher doses. According to correlation with MDA contents and antioxidant enzyme activities, defense system of Pungsannamul was less activated by proton-beam irradiation than that of Kwangan.

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    International Journal of Molecular Sciences.2022; 23(23): 15212.     CrossRef
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    Plants.2021; 10(5): 861.     CrossRef
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    Ryulyi Kang, Eunju Seo, Gyutae Kim, Aron Park, Woon Ji Kim, Si-Yong Kang, Bo-Keun Ha
    Plant Breeding and Biotechnology.2020; 8(3): 281.     CrossRef
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    Plants.2020; 9(9): 1234.     CrossRef
  • Growth Characteristics and Biological Responses of Korean Elite Soybean (Glycine maxL. Merr.) Cultivars Exposed to Gamma-Rays
    Juhyun Im, Jaihyunk Ryu, Woon Ji Kim, Sang Hun Kim, Si-Yong Kang, Bo-Keun Ha
    Plant Breeding and Biotechnology.2018; 6(2): 109.     CrossRef
  • Molecular characterization of proton beam-induced mutations in soybean using genotyping-by-sequencing
    Woon Ji Kim, Jaihyunk Ryu, Juhyun Im, Sang Hun Kim, Si-Yong Kang, Jeong-Hee Lee, Sung-Hwan Jo, Bo-Keun Ha
    Molecular Genetics and Genomics.2018; 293(5): 1169.     CrossRef
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Comparison of Phytochemicals and Antioxidant Activity in Blackberry (Rubus fruticosus L.) Fruits of Mutant Lines at the Different Harvest Time
Jaihyunk Ryu, Soon-Jae Kwon, Yeong Deuk Jo, Chang Hyun Jin, Bo Mi Nam, Seung Young Lee, Sang Wook Jeong, Seung Bin Im, Seung Cheol Oh, Lan Cho, Bo-Keun Ha, Si-Yong Kang
Plant Breed. Biotech. 2016;4(2):242-251.   Published online May 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.2.242

Blackberries (Rubus fruticosus L.) are a good source of antioxidants and contain appreciable levels of functional compounds. This study was carried out to evaluate fruit qualities (pH, soluble solids content, titratable acidity, and minerals), functional compounds (total phenolic content, total flavonoid content, anthocyanins, and ellagic acid), and antioxidant activity among five mutated blackberry lines over three ripening stages to examine the effect of fruit maturation on functional compounds and antioxidant activity. The content of sugars, total phenolic content, total flavonoid content, and anthocyanins (cyanidin-3-O-glucoside, cyanidin-3-O-xyloside, cyanidin-3-O-malonylglucoside, and cyanidin-3-O-dioxalylglucoside) increased as fruit development advanced, whereas the ellagic acid content decreased as the fruit became more mature. Among the minerals tested, potassium showed the highest concentrations at all stages of development. The antioxidant activity was correlated with total phenolic content (P≤0.01), total flavonoid content (P≤0.01), and total anthocyanins (P≤0.05). The results indicate that Maple and B201 lines contained the highest anthocyanin content and exhibited greater antioxidant activity.

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Genetic Diversity and Relationship Assessment based on AFLP Analysis in Blackberry (Rubus fructicosus L.) Mutant Lines
Jaihyunk Ryu, Bo-Keun Ha, Dong sub Kim, Jin-Baek Kim, Sang Hoon Kim, Joon-Woo Ahn, Il Yun Jeong, Han-Jik Jo, Ee-Yup Kim, Si-Yong Kang
Plant Breed. Biotech. 2014;2(4):386-395.   Published online December 31, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.4.386

This study was carried out to evaluate the genetic diversity and relationships among fifty-six blackberry (Rubus fructicosus) mutants derived from gamma-ray treatment (fifty-two lines) by analysis of Amplified fragment length polymorphism (AFLP) markers. Both cluster analysis and principal coordinate analysis (PCOORDA) were conducted in order to study the genetic diversity, using both morphological traits and AFLP makers. A total of 589 bands were amplified with an average of 58.9 bands per primer. Among them, 560 were identified to be polymorphic, with a rate of 95.08%. A showed a highly significant (P≤0.01) positive correlation with GD and PIC (r2=0.999). MI also showed a significant (P≤0.05) positive correlation with GD and PIC. According to the clustering analysis, all mutant lines could be classified into five categories, but the three gamma-ray treatment lines and the cross-bred line were not clustered into any groups. For the morphological traits, cluster analysis divided the blackberry germplasm into six clusters and two independent groups. In addition, the morphological dendrogram indicated an unclear pattern of division among the groups based on AFLP analysis. The findings of this study indicate that mutant lines have high genetic diversity, and can be effectively utilized as materials for the improvement of breeding.

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  • Development of new genomic resources and tools for molecular breeding in blackberry
    M.L. Worthington, R. Aryal, N.V. Bassil, D. Mead, G.E. Fernandez, J.R. Clark, F. Fernández-Fernández, C.E. Finn, K.E. Hummer, H. Ashrafi
    Acta Horticulturae.2020; (1277): 39.     CrossRef
  • Genotyping-by-sequencing based single nucleotide polymorphisms enabled Kompetitive Allele Specific PCR marker development in mutant Rubus genotypes
    Jaihyunk Ryu, Woon Ji Kim, Juhyun Im, Sang Hun Kim, Kang-Seop Lee, Han-Jig Jo, Ee-Youb Kim, Si-Yong Kang, Jeong-Hee Lee, Bo-Keun Ha
    Electronic Journal of Biotechnology.2018; 35: 57.     CrossRef
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