Ionizing radiation (IR) is regarded as an abiotic stressor for plants because it causes oxidative stress and changes the expression of genes. We investigated RNA sequencing-based global transcriptome changes induced by three different types of IR (gamma rays (GR), ion beams (IB), and proton beams (PB)) at different doses in rice. On average, 489 upregulated and 234 downregulated differentially expressed genes (DEGs) were found per sample. The union of the DEGs for each IR type was collected to simplify the comparison of effects among the different IR treatments. This resulted to a total of 1,558 DEGs after GR irradiation, 1,865 DEGs after IB irradiation, and 1,347 DEGs after PB irradiation. The gene ontology (GO) enrichment analysis of the union DEG sets revealed 69 and 12 commonly enriched GO terms for up- and downregulated DEGs, respectively, many of which were closely related to oxidative stress responses. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway mapping and enrichment analysis of the union DEG sets also showed that most of the DEGs fell into common pathways related to oxidative stress, stress signaling, and redox reactions. A total of 137 transcription factor (TF) genes were differentially expressed, and many belong to families associated with stress responses. Our results suggest that different types and doses of IR can induce universal gene expression changes in response to oxidative stress. This study contributes to our understanding of the molecular response mechanisms to IR in plants.
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Knowledge of genetic resources is essential for breeders to create new crop varieties with improved characteristics. In this respect, mutant populations may conveniently provide a powerful tool for identifying new functional genes. Therefore, we used the Micro-Tom tomato variety, which has a reduced size and a relatively short life-cycle compared to other commercial tomato cultivars, to construct a mutant population using gamma-ray radiation as a mutagen. To determine the optimal mutagenic intensity of gamma rays for tomato, dry seeds of Micro-Tom were irradiated with gamma-ray intensities from 0 to 1000 gray (Gy) with increments of 100 Gy. The germination rate of mutagenized seeds (M1 seeds) on MS media was not affected by the tested gamma-ray intensity range. However, seedling growth was severely reduced with increasing irradiation. Seedling growth rate at eight days after germination showed that the median gamma-ray doses for hypocotyl and root elongation were 600 and 300-400 Gy, respectively. The survival test for 300, 400, and 500 Gy-treated M1 seeds showed that survival rates significantly decreased with increasing irradiation. The survival rate of 400 Gy-radiated seeds was 48%, while that of 500 Gy-radiated seeds was only 25%, compared with the control treatment. Therefore, we concluded that gamma-ray irradiation at 300-400 Gy is best for tomato mutagenesis. To find new mutants, M2 seeds produced by M1 plants were grown. We found several mutants, including plants with varying cotyledon number, variegated or red leaves, and green hypocotyls.
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The leaves of roselle (
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Sweet sorghum (
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The faba bean produces medicinally useful phenolic compounds naturally, and is also a good source of food and animal feed. This study quantified the functional compounds and antioxidant activities of five faba bean genotypes selected on the basis of their seed yield and L-dopa content. The highest total tannin content (TTC) and total proanthocyanidin content (TPAC) were observed in the PI252004 genotype and the lowest content in the PI366039 genotype. The total phenolics content (TPC) and total flavonoid content (TFC) of the PI430715 genotype were higher than those of the other genotypes. LC-MS analyses identified 22 different phenolic compounds in the faba bean genotypes. The most abundant proanthocyanidin compounds were prodelphinidin and catechin and the predominant flavonols and flavones were myricetin, quercetin, apigenin, kaempferol, and luteolin-free aglycones or glycosides. The TFC was correlated with ferric-reducing antioxidant power activity (FRAP) (
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The faba bean, one of the few crops that produces L-3,4-dihydroxy-phenylalanine (L-dopa) naturally, is also a good source of fatty acids and isoflavones. This study analyzed fatty acids, L-dopa and isoflavones in the leaves, immature pods and seeds of selected high-yielding faba bean genotypes spring-sown in Korea. The most abundant fatty acids in the leaves, immature pods and seeds were linolenic acid (58.6–63.7%), linoleic acid (46.9–58.9%), and linoleic acid (45.7–63.6%), respectively. The L-dopa content was highest in the leaf for all the faba bean genotypes except PI430715 and PI614810 where it was highest in the immature pods. The α-linolenic acid and L-dopa contents of the seed and immature pod of the PI430715 and PI614810 genotypes were the highest of all the genotypes. Four isoflavones (daidzin, genistin, daidzein and genistein) were detected with levels of daidzin and genistin generally higher than those of daidzein and genistein in each part of the faba bean. The L-dopa content was correlated (
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The
objective
of this study was to analyze fruit qualities (i.e., pH, soluble solids content, titratable acidity, and mineral content) as well as fatty acid and phenolic compounds (i.e., ellagic acid and anthocyanins) among hybrid boysenberry lines developed by hybridization and gamma irradiation. There were no significant differences in the hybrid boysenberry fruit pH and titratable acidity (%) among the tested genotypes. However, the soluble solids content was higher in the BSA119 and BSA144 mutants than in the original genotype (BS_Hybrid). Meanwhile, linoleic acid was the most abundant fatty acid in the analyzed hybrid boysenberry fruits. The fatty acid composition did not differ significantly among the genotypes. The ellagic acid content of all genotypes ranged from 8.72 mg/100 g to 46.10 mg/100 g, with the highest concentration observed for the BSB127 genotype. Additionally, cyanidin-3-
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This study was carried out to evaluate the genetic diversity and relationships among fifty-six blackberry (
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